Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Actin-binding FH2/DRF autoregulatory

Term: IPR003104  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene263 biogeco3 v1.0 463
• AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
• FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable splicing factor 3a subunit 1-like 0.0
Internal
biog3_v1.0_unigene2691 biogeco3 v1.0 660
• AutoFact: Drf_FH1 multi-domain protein 2.0e-23
Putative coding
biog3_v1.0_unigene6490 biogeco3 v1.0 430
• AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
• Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
unknown
biog3_v1.0_unigene6672 biogeco3 v1.0 344
• AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
N-terminus
biog3_v1.0_unigene8727 biogeco3 v1.0 389
• AutoFact: RecName: Full=Formin-like protein 1; AltName: Full=OsFH1; Flags: Precursor dbj|BAB86073.1| putative FH protein NFH2 [Oryza sativa Japonica Group] dbj|BAC06896.1| putative FH protein NFH2 [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Formin-like protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: formin-like protein 6-like 0.0
Internal
biog3_v1.0_unigene9463 biogeco3 v1.0 421
• AutoFact: FH2 domain containing protein 0.0
• FL-Next: Isoform 2 of Formin-like protein 5 OS=Oryza sativa subsp. japonica GN=FH5 0.0
• Blast2go: actin binding 0.0
C-terminus
biog3_v1.0_unigene10406 biogeco3 v1.0 494
• AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
• FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable splicing factor 3a subunit 1-like 0.0
C-terminus
biog3_v1.0_unigene10638 biogeco3 v1.0 677
• AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
• FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable splicing factor 3a subunit 1-like 0.0
N-terminus
biog3_v1.0_unigene10813 biogeco3 v1.0 566
• AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
• Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
unknown
biog3_v1.0_unigene11503 biogeco3 v1.0 747
• AutoFact: Collagen multi-domain protein 5.0e-12
• Blast2go: unknown [Picea sitchensis] 0.0
unknown
biog3_v1.0_unigene14693 biogeco3 v1.0 225
• AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
• Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
Coding
biog3_v1.0_unigene15865 biogeco3 v1.0 310
• AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
• Blast2go: probable splicing factor 3a subunit 1-like 0.0
Coding
biog3_v1.0_unigene16681 biogeco3 v1.0 318
• AutoFact: RecName: Full=Formin-like protein 1; AltName: Full=OsFH1; Flags: Precursor dbj|BAB86073.1| putative FH protein NFH2 [Oryza sativa Japonica Group] dbj|BAC06896.1| putative FH protein NFH2 [Oryza sativa Japonica Group] 0.0
• Blast2go: protein 0.0
Coding
biog3_v1.0_unigene18085 biogeco3 v1.0 228
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RNW2_RICCO 0.0
• FL-Next: sp=Formin-like protein 7; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: diaphanous 1 0.0
Internal
biog3_v1.0_unigene20784 biogeco3 v1.0 290
• AutoFact: RecName: Full=Formin-like protein 1; AltName: Full=OsFH1; Flags: Precursor dbj|BAB86073.1| putative FH protein NFH2 [Oryza sativa Japonica Group] dbj|BAC06896.1| putative FH protein NFH2 [Oryza sativa Japonica Group] 0.0
• Blast2go: formin-like protein 6-like 0.0
Putative coding
biog3_v1.0_unigene22858 biogeco3 v1.0 246
• AutoFact: SRC2 protein n=1 Tax=Taiwania cryptomerioides RepID=A7XAJ8_9CONI 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: src2-like protein 0.0
Internal
biog3_v1.0_unigene23920 biogeco3 v1.0 311
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RNW2_RICCO 0.0
• FL-Next: sp=Formin-like protein 3; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: diaphanous 1 0.0
Internal
biog3_v1.0_unigene25103 biogeco3 v1.0 147
• AutoFact: RecName: Full=Formin-like protein 1; AltName: Full=OsFH1; Flags: Precursor dbj|BAB86073.1| putative FH protein NFH2 [Oryza sativa Japonica Group] dbj|BAC06896.1| putative FH protein NFH2 [Oryza sativa Japonica Group] 5.0e-09
• FL-Next: sp=Formin-like protein 11; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: formin-like protein 6-like 3.0693e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain