Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Outer membrane autotransporter barrel

Term: IPR006315  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene263 biogeco3 v1.0 463
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
Internal
biog3_v1.0_unigene1328 biogeco3 v1.0 458
AutoFact: DNA-directed RNA polymerase n=3 Tax=Magnoliophyta RepID=B9FZ51_ORYSJ 3.9937e-43
FL-Next: sp=DNA-directed RNA polymerase; Blastocystis hominis. 0.0
Blast2go: dna-directed rna polymerase 0.0
Internal
biog3_v1.0_unigene1412 biogeco3 v1.0 484
AutoFact: transmembrane protein 14C [Arabidopsis thaliana] gb|AAK91438.1| AT3g43520/T18D12_90 [Arabidopsis thaliana] gb|AAN18102.1| At3g43520/T18D12_90 [Arabidopsis thaliana] gb|AEE77802.1| transmembrane protein 14C [Arabidopsis thaliana] 9.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene1505 biogeco3 v1.0 701
AutoFact: proline-rich protein [Solanum tuberosum] 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: extensin-like protein 1.42814e-17
N-terminus
biog3_v1.0_unigene2691 biogeco3 v1.0 660
AutoFact: Drf_FH1 multi-domain protein 2.0e-23
Putative coding
biog3_v1.0_unigene3330 biogeco3 v1.0 325
AutoFact: proline-rich protein [Solanum tuberosum] 2.0e-10
Blast2go: extensin-like protein 1.42814e-17
unknown
biog3_v1.0_unigene3445 biogeco3 v1.0 195
AutoFact: Drf_FH1 multi-domain protein 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 5.85891e-26
N-terminus
biog3_v1.0_unigene4396 biogeco3 v1.0 219
AutoFact: proline-rich protein [Solanum tuberosum] 2.0e-10
Blast2go: extensin-like protein 1.42814e-17
unknown
biog3_v1.0_unigene4594 biogeco3 v1.0 694
AutoFact: Putative p23 co-chaperone n=1 Tax=Cryptomeria japonica RepID=Q1XG56_CRYJA 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein _027940-like 0.0
N-terminus
biog3_v1.0_unigene4722 biogeco3 v1.0 413
AutoFact: Drf_FH1 multi-domain protein 2.0e-16
Blast2go: protein 5.85891e-26
Coding
biog3_v1.0_unigene5172 biogeco3 v1.0 301
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana] gb|AAL85976.1| unknown protein [Arabidopsis thaliana] gb|AAM67536.1| unknown protein [Arabidopsis thaliana] dbj|BAD94504.1| hypo 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein 0.0
unknown
biog3_v1.0_unigene5262 biogeco3 v1.0 516
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana] gb|AAL85976.1| unknown protein [Arabidopsis thaliana] gb|AAM67536.1| unknown protein [Arabidopsis thaliana] dbj|BAD94504.1| hypo 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein 0.0
N-terminus
biog3_v1.0_unigene6028 biogeco3 v1.0 558
AutoFact: Putative p23 co-chaperone n=1 Tax=Cryptomeria japonica RepID=Q1XG56_CRYJA 3.00018e-42
Blast2go: uncharacterized protein _027940-like 0.0
Coding
biog3_v1.0_unigene6490 biogeco3 v1.0 430
AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
unknown
biog3_v1.0_unigene6672 biogeco3 v1.0 344
AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
N-terminus
biog3_v1.0_unigene6869 biogeco3 v1.0 832
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 1.0e-13
Coding
biog3_v1.0_unigene7439 biogeco3 v1.0 847
AutoFact: Drf_FH1 multi-domain protein 3.0e-21
Putative coding
biog3_v1.0_unigene8000 biogeco3 v1.0 345
AutoFact: Drf_FH1 multi-domain protein 2.0e-16
Blast2go: protein 5.85891e-26
Putative coding
biog3_v1.0_unigene9463 biogeco3 v1.0 421
AutoFact: FH2 domain containing protein 0.0
FL-Next: Isoform 2 of Formin-like protein 5 OS=Oryza sativa subsp. japonica GN=FH5 0.0
Blast2go: actin binding 0.0
C-terminus
biog3_v1.0_unigene10406 biogeco3 v1.0 494
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain