Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Outer membrane autotransporter barrel

Term: IPR006315  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene10638 biogeco3 v1.0 677
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
N-terminus
biog3_v1.0_unigene10813 biogeco3 v1.0 566
AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
unknown
biog3_v1.0_unigene11503 biogeco3 v1.0 747
AutoFact: Collagen multi-domain protein 5.0e-12
Blast2go: unknown [Picea sitchensis] 0.0
unknown
biog3_v1.0_unigene14549 biogeco3 v1.0 368
AutoFact: DUF1421 multi-domain protein 2.0e-18
Coding
biog3_v1.0_unigene14693 biogeco3 v1.0 225
AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
Coding
biog3_v1.0_unigene14791 biogeco3 v1.0 423
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 1.0e-13
Coding
biog3_v1.0_unigene15633 biogeco3 v1.0 234
AutoFact: photoassimilate-responsive protein PAR-like protein [Arabidopsis thaliana] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100246012 0.0
Putative C-terminus
biog3_v1.0_unigene15865 biogeco3 v1.0 310
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
Coding
biog3_v1.0_unigene16505 biogeco3 v1.0 199
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 1.0e-13
unknown
biog3_v1.0_unigene17010 biogeco3 v1.0 202
AutoFact: proline-rich protein [Solanum tuberosum] 2.0e-10
Blast2go: extensin-like protein 1.42814e-17
unknown
biog3_v1.0_unigene18085 biogeco3 v1.0 228
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RNW2_RICCO 0.0
FL-Next: sp=Formin-like protein 7; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: diaphanous 1 0.0
Internal
biog3_v1.0_unigene18752 biogeco3 v1.0 103
AutoFact: Putative p23 co-chaperone n=1 Tax=Cryptomeria japonica RepID=Q1XG56_CRYJA 3.00018e-42
Blast2go: uncharacterized protein _027940-like 0.0
unknown
biog3_v1.0_unigene21648 biogeco3 v1.0 417
AutoFact: DNA-directed RNA polymerase n=3 Tax=Magnoliophyta RepID=B9FZ51_ORYSJ 3.9937e-43
Blast2go: dna-directed rna polymerase 0.0
Coding
biog3_v1.0_unigene22142 biogeco3 v1.0 171
AutoFact: DUF1421 multi-domain protein 1.0e-18
unknown
biog3_v1.0_unigene22747 biogeco3 v1.0 240
AutoFact: Drf_FH1 multi-domain protein 2.0e-18
unknown
biog3_v1.0_unigene22858 biogeco3 v1.0 246
AutoFact: SRC2 protein n=1 Tax=Taiwania cryptomerioides RepID=A7XAJ8_9CONI 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: src2-like protein 0.0
Internal
biog3_v1.0_unigene23920 biogeco3 v1.0 311
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RNW2_RICCO 0.0
FL-Next: sp=Formin-like protein 3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: diaphanous 1 0.0
Internal
biog3_v1.0_unigene25323 biogeco3 v1.0 331
AutoFact: DUF1421 multi-domain protein 9.0e-19
Coding
biog3_v1.0_unigene25683 biogeco3 v1.0 661
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana] gb|AAL85976.1| unknown protein [Arabidopsis thaliana] gb|AAM67536.1| unknown protein [Arabidopsis thaliana] dbj|BAD94504.1| hypo 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain