Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: Histone H2A

Term: IPR002119  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene607 biogeco3 v1.0 1486
AutoFact: lanatoside 15'-O-acetylesterase [Digitalis lanata] 0.0
FL-Next: sp=GDSL esterase/lipase At4g01130; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: gdsl esterase lipase 0.0
Complete
biog3_v1.0_unigene1290 biogeco3 v1.0 751
AutoFact: Glycoside hydrolase, family 17; Virulence factor, pectin lyase fold; X8 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
Putative C-terminus
biog3_v1.0_unigene1615 biogeco3 v1.0 181
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 2.0e-36
Blast2go: histone h2a 1.71538e-38
unknown
biog3_v1.0_unigene1680 biogeco3 v1.0 1096
AutoFact: alpha-L-fucosidase 3 [Arabidopsis thaliana] sp|Q9FXE5.1|FUCO3_ARATH RecName: Full=Alpha-L-fucosidase 3; AltName: Full=Alpha-1,2-fucosidase; Short=AtFXG1; AltName: Full=Alpha-L-fucoside fucohydrolase 3; Flags: Precursor gb|AAG28886.1|AC008113_2 F12A21.4 [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gdsl esterase lipase 0.0
Putative C-terminus
biog3_v1.0_unigene5178 biogeco3 v1.0 2036
AutoFact: Putative glucan-endo-1,3-beta-glucosidase (Fragment) n=1 Tax=Pinus pinaster RepID=A4FT65_PINPS 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
Complete
biog3_v1.0_unigene5438 biogeco3 v1.0 417
AutoFact: Histone H2A n=2 Tax=Picea sitchensis RepID=A9NQY2_PICSI 7.0e-32
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 6.58494e-39
N-terminus
biog3_v1.0_unigene5605 biogeco3 v1.0 403
AutoFact: Histone H2A n=2 Tax=Picea sitchensis RepID=A9NQY2_PICSI 7.0e-32
Blast2go: histone h2a 6.58494e-39
Putative coding
biog3_v1.0_unigene6277 biogeco3 v1.0 187
AutoFact: Histone H2A.6 n=6 Tax=Spermatophyta RepID=H2A6_ARATH 7.0e-35
Blast2go: histone h2a-like protein 1.96182e-44
unknown
biog3_v1.0_unigene6443 biogeco3 v1.0 630
AutoFact: Histone H2A.6 n=6 Tax=Spermatophyta RepID=H2A6_ARATH 7.0e-35
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 1.96182e-44
Complete
biog3_v1.0_unigene6569 biogeco3 v1.0 2158
AutoFact: Glucan endo-1,3-beta-glucosidase, putative n=1 Tax=Ricinus communis RepID=B9R8R1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta- -glucanase 0.0
Complete
biog3_v1.0_unigene6809 biogeco3 v1.0 714
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 2.0e-36
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.71538e-38
Complete
biog3_v1.0_unigene7679 biogeco3 v1.0 268
AutoFact: putative beta 1,3-glucanase [Oryza sativa Japonica Group] gb|ABF98103.1| Glucan endo-1,3-beta-glucosidase 7 precursor, putative, expressed [Oryza sativa Japonica Group] gb|EEE63416.1| hypothetical protein OsJ_18228 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
Putative C-terminus
biog3_v1.0_unigene8914 biogeco3 v1.0 350
AutoFact: Glycoside hydrolase, family 17; Virulence factor, pectin lyase fold; X8 [Medicago truncatula] 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
unknown
biog3_v1.0_unigene11514 biogeco3 v1.0 912
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 0.0
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone 2 0.0
Complete
biog3_v1.0_unigene11568 biogeco3 v1.0 821
AutoFact: Histone H2AX n=7 Tax=Spermatophyta RepID=H2AX_PICAB 0.0
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2a 0.0
Complete
biog3_v1.0_unigene11586 biogeco3 v1.0 1006
AutoFact: putative beta 1,3-glucanase [Oryza sativa Japonica Group] gb|ABF98103.1| Glucan endo-1,3-beta-glucosidase 7 precursor, putative, expressed [Oryza sativa Japonica Group] gb|EEE63416.1| hypothetical protein OsJ_18228 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
Internal
biog3_v1.0_unigene13217 biogeco3 v1.0 295
AutoFact: Histone H2A n=1 Tax=Populus trichocarpa RepID=B9I7E7_POPTR 2.0e-35
Blast2go: histone h2a-like protein 0.0
unknown
biog3_v1.0_unigene13578 biogeco3 v1.0 351
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 7.0e-34
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 6.44597e-44
C-terminus
biog3_v1.0_unigene14779 biogeco3 v1.0 222
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 1.0e-24
Blast2go: histone h2a 8.9211e-30
Putative coding
biog3_v1.0_unigene18053 biogeco3 v1.0 460
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 0.0
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone 2 0.0
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain