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Assembly Name: biogeco3 v1.0

Name: Histone H2A

Term: IPR002119  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene18181 biogeco3 v1.0 167
AutoFact: Isoform 2 of Probable carboxylesterase 11 n=1 Tax=Arabidopsis thaliana RepID=Q9LK21-2 0.0
FL-Next: sp=Probable carboxylesterase 16; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable carboxylesterase 11-like 0.0
Internal
biog3_v1.0_unigene19381 biogeco3 v1.0 336
AutoFact: Glycoside hydrolase, family 17; Virulence factor, pectin lyase fold; X8 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
Putative C-terminus
biog3_v1.0_unigene19633 biogeco3 v1.0 321
AutoFact: lanatoside 15-O-acetylesterase [Digitalis grandiflora] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lanatoside 15 -o-acetylesterase 0.0
Internal
biog3_v1.0_unigene19838 biogeco3 v1.0 134
AutoFact: putative beta 1,3-glucanase [Oryza sativa Japonica Group] gb|ABF98103.1| Glucan endo-1,3-beta-glucosidase 7 precursor, putative, expressed [Oryza sativa Japonica Group] gb|EEE63416.1| hypothetical protein OsJ_18228 [Oryza sativa Japonica Group] 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
unknown
biog3_v1.0_unigene20747 biogeco3 v1.0 307
AutoFact: Glycoside hydrolase, family 17; Virulence factor, pectin lyase fold; X8 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
Putative N-terminus
biog3_v1.0_unigene23184 biogeco3 v1.0 69
AutoFact: lanatoside 15'-O-acetylesterase [Digitalis lanata] 0.0
Blast2go: gdsl esterase lipase 0.0
unknown
biog3_v1.0_unigene23185 biogeco3 v1.0 80
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NTX3_PICSI 9.80909e-45
Blast2go: histone h2a 0.0
unknown
biog3_v1.0_unigene23329 biogeco3 v1.0 410
AutoFact: Glycoside hydrolase, family 17; Virulence factor, pectin lyase fold; X8 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
Internal
biog3_v1.0_unigene24056 biogeco3 v1.0 189
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 1.0e-24
Blast2go: histone h2a 8.9211e-30
unknown
biog3_v1.0_unigene24731 biogeco3 v1.0 714
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 2.0e-25
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 2.50358e-31
Complete
biog3_v1.0_unigene25475 biogeco3 v1.0 319
AutoFact: Glucan endo-1,3-beta-glucosidase, putative n=1 Tax=Ricinus communis RepID=B9R8R1_RICCO 0.0
Blast2go: beta- -glucanase 0.0
Putative coding
biog3_v1.0_unigene25518 biogeco3 v1.0 397
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 4.99983e-42
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 0.0
C-terminus
biog3_v1.0_unigene25733 biogeco3 v1.0 433
AutoFact: Histone H2A n=1 Tax=Populus trichocarpa RepID=B9I7E7_POPTR 2.0e-35
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 0.0
N-terminus
biog3_v1.0_unigene25813 biogeco3 v1.0 248
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 5.0e-25
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 2.5647e-30
C-terminus
biog3_v1.0_unigene25990 biogeco3 v1.0 226
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 9.0e-26
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.93918e-30
N-terminus
biog3_v1.0_unigene26271 biogeco3 v1.0 367
AutoFact: lanatoside 15-O-acetylesterase [Digitalis grandiflora] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lanatoside 15 -o-acetylesterase 0.0
Internal
biog3_v1.0_unigene26373 biogeco3 v1.0 274
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 1.0e-24
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.71789e-30
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain