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Assembly Name: biogeco3 v1.0

Name: Tubulin/FtsZ, 2-layer sandwich domain

Term: IPR018316  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene62 biogeco3 v1.0 332
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta chain 0.0
Internal
biog3_v1.0_unigene178 biogeco3 v1.0 1626
AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
Blast2go: alpha tubulin 1 0.0
Complete
biog3_v1.0_unigene2911 biogeco3 v1.0 468
AutoFact: Cell division protein ftsZ, putative n=1 Tax=Ricinus communis RepID=B9SRX2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid division protein 0.0
Internal
biog3_v1.0_unigene4104 biogeco3 v1.0 116
AutoFact: Tubulin beta-2/beta-3 chain n=340 Tax=Eukaryota RepID=TBB2_ARATH 0.0
Blast2go: tubulin beta chain 0.0
unknown
biog3_v1.0_unigene4956 biogeco3 v1.0 396
AutoFact: FtsZ-like protein n=2 Tax=Nicotiana tabacum RepID=Q95DV5_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid division protein 0.0
Putative C-terminus
biog3_v1.0_unigene5002 biogeco3 v1.0 745
AutoFact: PREDICTED: similar to phosphatidylserine decarboxylase n=1 Tax=Vitis vinifera RepID=UPI0001984625 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: phosphatidylserine decarboxylase 0.0
N-terminus
biog3_v1.0_unigene6294 biogeco3 v1.0 388
AutoFact: Tubulin gamma-1 chain n=30 Tax=Embryophyta RepID=TBG1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gamma tubulin 0.0
Internal
biog3_v1.0_unigene6325 biogeco3 v1.0 368
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SPT4_RICCO 0.0
FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: swap surp domain-containing protein 0.0
Internal
biog3_v1.0_unigene10539 biogeco3 v1.0 885
AutoFact: FtsZ-like protein n=2 Tax=Nicotiana tabacum RepID=Q95DV5_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid division protein 0.0
Internal
biog3_v1.0_unigene10674 biogeco3 v1.0 1307
AutoFact: Cell division protein ftsZ, putative n=1 Tax=Ricinus communis RepID=B9SRX2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid division protein 0.0
C-terminus
biog3_v1.0_unigene11664 biogeco3 v1.0 544
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: beta chain 0.0
Complete
biog3_v1.0_unigene12198 biogeco3 v1.0 1507
AutoFact: Tubulin beta-2/beta-3 chain n=340 Tax=Eukaryota RepID=TBB2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin beta chain 0.0
Complete
biog3_v1.0_unigene12274 biogeco3 v1.0 1447
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin beta 0.0
C-terminus
biog3_v1.0_unigene12280 biogeco3 v1.0 1633
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-tubulin 2 0.0
Complete
biog3_v1.0_unigene12284 biogeco3 v1.0 517
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta chain 0.0
Internal
biog3_v1.0_unigene14487 biogeco3 v1.0 352
AutoFact: Tubulin gamma-1 chain n=30 Tax=Embryophyta RepID=TBG1_ARATH 0.0
FL-Next: sp=Tubulin gamma chain; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: gamma tubulin 0.0
Internal
biog3_v1.0_unigene16760 biogeco3 v1.0 68
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
Blast2go: beta-tubulin 2 0.0
unknown
biog3_v1.0_unigene18626 biogeco3 v1.0 203
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta chain 0.0
N-terminus
biog3_v1.0_unigene20082 biogeco3 v1.0 284
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SPT4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: swap surp domain-containing protein 0.0
Internal
biog3_v1.0_unigene21771 biogeco3 v1.0 241
AutoFact: Tubulin alpha-1 chain n=5 Tax=Coelomata RepID=F4WDI4_9HYME 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha tubulin 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain