Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Zinc finger, CW-type

Term: IPR011124  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene546 biogeco3 v1.0 409
AutoFact: histone-lysine N-methyltransferase SETD2 [Arabidopsis thaliana] gb|AEE35961.1| histone-lysine N-methyltransferase SETD2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Huntingtin interacting protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: set domain protein 0.0
Internal
biog3_v1.0_unigene1033 biogeco3 v1.0 595
AutoFact: zf-CW domain containing protein 2.0e-10
FL-Next: sp=B3 domain-containing protein Os07g0679700; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: b3 domain-containing protein os07g0679700-like 0.0
Internal
biog3_v1.0_unigene1120 biogeco3 v1.0 269
AutoFact: WS0299.BR_B08 SS-IB-A-FL-15 Picea sitchensis cDNA clone WS0299_B08 3, mRNA sequence. 0.0
Blast2go: uncharacterized protein loc100254466 2.15301e-22
unknown
biog3_v1.0_unigene1773 biogeco3 v1.0 388
AutoFact: WS0299.BR_B08 SS-IB-A-FL-15 Picea sitchensis cDNA clone WS0299_B08 3, mRNA sequence. 0.0
Blast2go: uncharacterized protein loc100254466 2.15301e-22
Coding
biog3_v1.0_unigene4591 biogeco3 v1.0 482
AutoFact: SET domain protein n=1 Tax=Populus trichocarpa RepID=B9H7V1_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n-methyltransferase ashh1-like 0.0
Putative C-terminus
biog3_v1.0_unigene4842 biogeco3 v1.0 487
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SRS4_RICCO 2.0e-39
FL-Next: sp=B3 domain-containing protein Os07g0679700; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 3.53968e-42
Internal
biog3_v1.0_unigene7281 biogeco3 v1.0 462
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AEC06861.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring fyve phd zinc finger-containing protein 0.0
Putative N-terminus
biog3_v1.0_unigene7834 biogeco3 v1.0 249
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AEC06861.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 9.0e-36
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene8161 biogeco3 v1.0 319
AutoFact: Trithorax, putative n=1 Tax=Ricinus communis RepID=B9RII0_RICCO 0.0
FL-Next: tr=Trithorax, putative; Ricinus communis (Castor bean). 0.0
Blast2go: histone-lysine n-methyltransferase atx4-like 0.0
Internal
biog3_v1.0_unigene8890 biogeco3 v1.0 366
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AEC06861.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 9.0e-36
Blast2go: protein 0.0
Coding
biog3_v1.0_unigene10810 biogeco3 v1.0 1370
AutoFact: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] sp|Q8LA53.1|MBD2_ARATH RecName: Full=M 0.0
FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl-cpg-binding domain protein 02 0.0
Complete
biog3_v1.0_unigene11023 biogeco3 v1.0 613
AutoFact: SET domain protein n=1 Tax=Populus trichocarpa RepID=B9H7V1_POPTR 0.0
FL-Next: sp=Histone-lysine N-methyltransferase ASHH1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n-methyltransferase ashh1-like 0.0
C-terminus
biog3_v1.0_unigene13297 biogeco3 v1.0 568
AutoFact: CW-type zinc-finger protein [Arabidopsis thaliana] dbj|BAC42503.1| unknown protein [Arabidopsis thaliana] gb|AAP21295.1| At4g15730 [Arabidopsis thaliana] gb|AEE83641.1| CW-type zinc-finger protein [Arabidopsis thaliana] 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc ion binding protein 2.44546e-40
Internal
biog3_v1.0_unigene14430 biogeco3 v1.0 386
AutoFact: Unassigned protein
Blast2go: set domain protein 1.4498e-27
Coding
biog3_v1.0_unigene17516 biogeco3 v1.0 236
AutoFact: PREDICTED: MORC family CW-type zinc finger 3 isoform 1 [Bos taurus] ref|XP_002685198.1| PREDICTED: MORC family CW-type zinc finger 3 [Bos taurus] gb|DAA32968.1| MORC family CW-type zinc finger 3 [Bos taurus] 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: morc family cw-type zinc finger protein 3 0.0
Internal
biog3_v1.0_unigene18261 biogeco3 v1.0 312
AutoFact: Trithorax, putative n=1 Tax=Ricinus communis RepID=B9RII0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n-methyltransferase atx4-like 0.0
Putative Complete
biog3_v1.0_unigene18536 biogeco3 v1.0 213
AutoFact: CW-type zinc-finger protein [Arabidopsis thaliana] dbj|BAC42503.1| unknown protein [Arabidopsis thaliana] gb|AAP21295.1| At4g15730 [Arabidopsis thaliana] gb|AEE83641.1| CW-type zinc-finger protein [Arabidopsis thaliana] 2.0e-17
Blast2go: uncharacterized protein 6.10097e-27
unknown
biog3_v1.0_unigene18741 biogeco3 v1.0 130
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SRS4_RICCO 2.0e-39
Blast2go: protein 3.53968e-42
unknown
biog3_v1.0_unigene22031 biogeco3 v1.0 225
AutoFact: Huntingtin interacting protein, putative n=1 Tax=Ricinus communis RepID=B9S2T8_RICCO 1.0e-28
Blast2go: histone-lysine n-methyltransferase ashh2-like 1.01747e-33
Putative coding
biog3_v1.0_unigene24063 biogeco3 v1.0 115
AutoFact: WS0299.BR_B08 SS-IB-A-FL-15 Picea sitchensis cDNA clone WS0299_B08 3, mRNA sequence. 0.0
Blast2go: uncharacterized protein loc100254466 2.15301e-22
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain