|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene12190
|
biogeco3 v1.0
|
642
|
|
• AutoFact: HECT; Ubiquitin [Medicago truncatula]
|
0.0
|
|
• FL-Next: sp=E3 ubiquitin-protein ligase UPL5; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase upl5
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene13412
|
biogeco3 v1.0
|
354
|
|
• AutoFact: HECT; Ubiquitin [Medicago truncatula]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase upl5
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene13888
|
biogeco3 v1.0
|
504
|
|
• AutoFact: ring zinc finger protein-like protein [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: cleavage and polyadenylation specificity
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene13988
|
biogeco3 v1.0
|
353
|
|
• AutoFact: Poly(A) polymerase, putative n=1 Tax=Ricinus communis RepID=B9T6L0_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: polynucleotide adenylyltransferase-like protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene14753
|
biogeco3 v1.0
|
321
|
|
• AutoFact: E3 ubiquitin-protein ligase [Arabidopsis thaliana] sp|Q93Z92.1|RING4_ARATH RecName: Full=E3 ubiquitin-protein ligase At4g11680; AltName: Full=RING finger protein At4g11680 gb|AAL15343.1| AT4g11680/T5C23_110 [Arabidopsis thaliana] gb|AAR23720.1| At4g11680/
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene15343
|
biogeco3 v1.0
|
128
|
|
• AutoFact: fiber protein Fb2 [Gossypium barbadense]
|
3.0e-39
|
|
• Blast2go: protein
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene16300
|
biogeco3 v1.0
|
375
|
|
• AutoFact: Poly(A) polymerase, putative n=1 Tax=Ricinus communis RepID=B9T6L0_RICCO
|
0.0
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
• Blast2go: polynucleotide adenylyltransferase-like protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene17039
|
biogeco3 v1.0
|
317
|
|
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9R8R6_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: zinc finger
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene17753
|
biogeco3 v1.0
|
316
|
|
• AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9SA71_RICCO
|
0.0
|
|
• Blast2go: retinoblastoma-binding protein 5-like
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene17912
|
biogeco3 v1.0
|
212
|
|
• AutoFact: Os01g0104000 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q658C8_ORYSJ
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene18366
|
biogeco3 v1.0
|
187
|
|
• AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene18387
|
biogeco3 v1.0
|
218
|
|
• AutoFact: Poly(A) polymerase, putative n=1 Tax=Ricinus communis RepID=B9T6L0_RICCO
|
3.0e-14
|
|
• Blast2go: polynucleotide adenylyltransferase-like protein
|
5.56459e-15
|
|
unknown
|
|
biog3_v1.0_unigene19122
|
biogeco3 v1.0
|
376
|
|
• AutoFact: ubiquitin carboxyl-terminal hydrolase 16 [Arabidopsis thaliana] sp|Q9SB51.1|UBP16_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName: Full=Deubiquitinating enzyme 16; Short=AtUBP16; AltName: Full=Ubiquitin thiolesterase 16; AltName: Ful
|
4.0e-13
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ubiquitin carboxyl-terminal hydrolase 16-like
|
6.30848e-18
|
|
Internal
|
|
biog3_v1.0_unigene19893
|
biogeco3 v1.0
|
197
|
|
• AutoFact: vacuolar protein sorting 13C protein-like [Oryza sativa Japonica Group] dbj|BAD19586.1| vacuolar protein sorting 13C protein-like [Oryza sativa Japonica Group]
|
4.99997e-41
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: pleckstrin homology domain-containing protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene20120
|
biogeco3 v1.0
|
239
|
|
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070 gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana] gb|AEE28239.1| pentatricopeptide repea
|
5.0e-29
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: pentatricopeptide repeat-containing
|
5.14557e-42
|
|
Internal
|
|
biog3_v1.0_unigene20422
|
biogeco3 v1.0
|
436
|
|
• AutoFact: E3 ubiquitin-protein ligase [Arabidopsis thaliana] sp|Q93Z92.1|RING4_ARATH RecName: Full=E3 ubiquitin-protein ligase At4g11680; AltName: Full=RING finger protein At4g11680 gb|AAL15343.1| AT4g11680/T5C23_110 [Arabidopsis thaliana] gb|AAR23720.1| At4g11680/
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene20457
|
biogeco3 v1.0
|
217
|
|
• AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9SA71_RICCO
|
0.0
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
• Blast2go: retinoblastoma-binding protein 5-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene25149
|
biogeco3 v1.0
|
97
|
|
• AutoFact: DUF2054 domain containing protein
|
5.60519e-45
|
|
• Blast2go: uncharacterized protein
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene26265
|
biogeco3 v1.0
|
294
|
|
• AutoFact: ubiquitin carboxyl-terminal hydrolase 18 [Arabidopsis thaliana] sp|Q67XW5.2|UBP18_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 18; AltName: Full=Deubiquitinating enzyme 18; Short=AtUBP18; AltName: Full=Ubiquitin thiolesterase 18; AltName: Ful
|
8.0e-25
|
|
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 18; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: ubiquitin carboxyl-terminal hydrolase 17-like
|
9.27656e-30
|
|
Internal
|
|
biog3_v1.0_unigene26277
|
biogeco3 v1.0
|
289
|
|
• AutoFact: HECT; Ubiquitin [Medicago truncatula]
|
0.0
|
|
• FL-Next: sp=E3 ubiquitin-protein ligase UPL5; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase upl5
|
0.0
|
|
C-terminus
|
