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Assembly Name: biogeco3 v1.0

Name: Uncharacterised protein family UPF0497, trans-membrane plant subgroup

Term: IPR006459  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene275 biogeco3 v1.0 483
AutoFact: UPF0497 membrane protein 4 n=1 Tax=Picea sitchensis RepID=U4974_PICSI 0.0
FL-Next: sp=CASP-like protein 8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: salicylic acid-induced fragment 1 protein 0.0
C-terminus
biog3_v1.0_unigene681 biogeco3 v1.0 596
AutoFact: UPF0497 membrane protein 1 n=2 Tax=Vitis vinifera RepID=U4971_VITVI 6.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cspl1_picsi ame: full=casp-like protein 1 0.0
Complete
biog3_v1.0_unigene3269 biogeco3 v1.0 650
AutoFact: UPF0497 membrane protein 1 n=1 Tax=Picea sitchensis RepID=U4971_PICSI 6.0e-23
FL-Next: sp=CASP-like protein 5; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 7.04015e-28
C-terminus
biog3_v1.0_unigene3501 biogeco3 v1.0 448
AutoFact: UPF0497 membrane protein 5 n=1 Tax=Picea sitchensis RepID=U4975_PICSI 0.0
FL-Next: sp=CASP-like protein 9; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: integral membrane family protein 0.0
Putative N-terminus
biog3_v1.0_unigene5958 biogeco3 v1.0 1094
AutoFact: UPF0497 membrane protein 3 n=1 Tax=Picea sitchensis RepID=U4973_PICSI 0.0
FL-Next: sp=CASP-like protein 7; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Complete
biog3_v1.0_unigene10252 biogeco3 v1.0 725
AutoFact: UPF0497 membrane protein 5 n=1 Tax=Picea sitchensis RepID=U4975_PICSI 9.80909e-45
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: integral membrane family protein 0.0
Complete
biog3_v1.0_unigene11150 biogeco3 v1.0 709
AutoFact: UPF0497 membrane protein 1 n=1 Tax=Picea sitchensis RepID=U4971_PICSI 1.99965e-42
FL-Next: sp=CASP-like protein 5; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: integral membrane family protein 0.0
C-terminus
biog3_v1.0_unigene13611 biogeco3 v1.0 485
AutoFact: UPF0497 membrane protein 1 n=1 Tax=Picea sitchensis RepID=U4971_PICSI 6.0e-35
FL-Next: sp=CASP-like protein 5; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.05788e-41
C-terminus
biog3_v1.0_unigene13831 biogeco3 v1.0 480
AutoFact: UPF0497 membrane protein 2 n=1 Tax=Picea sitchensis RepID=U4972_PICSI 2.0e-34
FL-Next: sp=CASP-like protein 3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: salicylic acid-induced fragment 1 protein 0.0
C-terminus
biog3_v1.0_unigene16133 biogeco3 v1.0 178
AutoFact: UPF0497 membrane protein 5 n=1 Tax=Picea sitchensis RepID=U4975_PICSI 0.0
FL-Next: sp=CASP-like protein 9; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: integral membrane family protein 0.0
Internal
biog3_v1.0_unigene18686 biogeco3 v1.0 100
AutoFact: UPF0497 membrane protein 1 n=1 Tax=Picea sitchensis RepID=U4971_PICSI 1.99965e-42
Blast2go: integral membrane family protein 0.0
unknown
biog3_v1.0_unigene19208 biogeco3 v1.0 183
AutoFact: UPF0497 membrane protein 1 n=1 Tax=Picea sitchensis RepID=U4971_PICSI 1.99965e-42
Blast2go: integral membrane family protein 0.0
unknown
biog3_v1.0_unigene22842 biogeco3 v1.0 213
AutoFact: UPF0497 membrane protein 1 n=2 Tax=Vitis vinifera RepID=U4971_VITVI 6.0e-06
Blast2go: cspl1_picsi ame: full=casp-like protein 1 0.0
Putative coding
biog3_v1.0_unigene24949 biogeco3 v1.0 111
AutoFact: UPF0497 membrane protein 1 n=1 Tax=Picea sitchensis RepID=U4971_PICSI 8.99634e-43
Blast2go: integral membrane family protein 0.0
unknown
biog3_v1.0_unigene25133 biogeco3 v1.0 137
AutoFact: UPF0497 membrane protein 2 n=1 Tax=Picea sitchensis RepID=U4972_PICSI 2.0e-34
Blast2go: salicylic acid-induced fragment 1 protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain