Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: RNA helicase, ATP-dependent, SK12/DOB1

Term: IPR016438  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene9827 biogeco3 v1.0 741
AutoFact: Helicase, putative n=1 Tax=Ricinus communis RepID=B9SPB9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: superkiller viralicidic activity 2-like 2-like 0.0
Internal
biog3_v1.0_unigene11054 biogeco3 v1.0 674
AutoFact: RNA helicase, ATP-dependent, SK12/DOB1 protein [Arabidopsis thaliana] gb|AAC67203.2| expressed protein [Arabidopsis thaliana] gb|AAO64196.1| putative DEAD/DEAH box RNA helicase (HUA ENHANCER2) [Arabidopsis thaliana] gb|AEC06028.1| RNA helicase, ATP-depend 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hua enhancer 2 0.0
C-terminus
biog3_v1.0_unigene11766 biogeco3 v1.0 525
AutoFact: RNA helicase [Arabidopsis thaliana] gb|AAD39319.1|AC007258_8 Very similar to helicases [Arabidopsis thaliana] dbj|BAD44599.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33616.1| RNA helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: skiv2l2 protein 0.0
C-terminus
biog3_v1.0_unigene17890 biogeco3 v1.0 239
AutoFact: Helicase, putative n=1 Tax=Ricinus communis RepID=B9SZG8_RICCO 0.0
Blast2go: hua enhancer 2 0.0
Putative coding
biog3_v1.0_unigene19910 biogeco3 v1.0 250
AutoFact: [L] COG4581 Superfamily II RNA helicase 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: superkiller viralicidic activity 2-like 2-like 0.0
Internal
biog3_v1.0_unigene20390 biogeco3 v1.0 485
AutoFact: putative Helicase SKI2W [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene24671 biogeco3 v1.0 305
AutoFact: Helicase, putative n=1 Tax=Ricinus communis RepID=B9SPB9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: superkiller viralicidic activity 2-like 2-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain