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Assembly Name: biogeco3 v1.0

Name: SET domain

Term: IPR001214  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene8340 biogeco3 v1.0 380
AutoFact: Forever young oxidoreductase n=2 Tax=Solanum RepID=Q8W2K0_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: forever young oxidoreductase 0.0
N-terminus
biog3_v1.0_unigene8419 biogeco3 v1.0 366
AutoFact: histone-lysine N-methyltransferase CLF [Arabidopsis thaliana] sp|P93831.2|CLF_ARATH RecName: Full=Histone-lysine N-methyltransferase CLF; AltName: Full=Polycomb group protein CURLY LEAF; AltName: Full=Protein INCURVATA 1; AltName: Full=Protein SET DOMAIN 0.0
FL-Next: sp=Histone-lysine N-methyltransferase CLF; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: polycomb protein ez1 0.0
Internal
biog3_v1.0_unigene9005 biogeco3 v1.0 297
AutoFact: [R] COG2940 Proteins containing SET domain 1.0e-23
Blast2go: histone-lysine n-methyltransferase suvr2-like 0.0
Coding
biog3_v1.0_unigene9874 biogeco3 v1.0 547
AutoFact: SET domain-containing protein [Arabidopsis thaliana] gb|AAV84478.1| At3g55080 [Arabidopsis thaliana] gb|AAX12881.1| At3g55080 [Arabidopsis thaliana] gb|AEE79337.1| SET domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: set domain-containing protein 0.0
Internal
biog3_v1.0_unigene10357 biogeco3 v1.0 384
AutoFact: [R] COG2940 Proteins containing SET domain 9.0e-31
Blast2go: histone-lysine n-methyltransferase suvr5-like 0.0
Coding
biog3_v1.0_unigene11023 biogeco3 v1.0 613
AutoFact: SET domain protein n=1 Tax=Populus trichocarpa RepID=B9H7V1_POPTR 0.0
FL-Next: sp=Histone-lysine N-methyltransferase ASHH1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n-methyltransferase ashh1-like 0.0
C-terminus
biog3_v1.0_unigene14430 biogeco3 v1.0 386
AutoFact: Unassigned protein
Blast2go: set domain protein 1.4498e-27
Coding
biog3_v1.0_unigene15734 biogeco3 v1.0 308
AutoFact: ATP-binding cassette transporter, subfamily D, member 9, SmABCD9 n=2 Tax=Selaginella moellendorffii RepID=D8QV80_SELML 6.0e-30
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter-like protein 7.18049e-35
C-terminus
biog3_v1.0_unigene16082 biogeco3 v1.0 289
AutoFact: SET domain-containing protein (Fragment) n=2 Tax=Populus trichocarpa RepID=B9HSV4_POPTR 3.0e-32
FL-Next: sp=Probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n- h3 lysine-9 specific suvh9 5.13925e-32
C-terminus
biog3_v1.0_unigene16237 biogeco3 v1.0 354
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SV05_VITVI 0.0
FL-Next: sp=Histone-lysine N-methyltransferase ATX3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n-methyltransferase 0.0
Internal
biog3_v1.0_unigene17113 biogeco3 v1.0 391
AutoFact: SET domain-containing protein (Fragment) n=1 Tax=Picea abies RepID=Q3ZDI7_PICAB 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: white-brown-complex abc transporter family 1.67395e-16
Internal
biog3_v1.0_unigene17320 biogeco3 v1.0 163
AutoFact: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Arabidopsis thaliana] sp|Q8GZB6.2|SUVH4_ARATH RecName: Full=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4; AltName: Full=Histone H3-K9 methyltransferase 4; Short=H3-K9-HMTase 0.0
FL-Next: sp=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n- h3 lysine-9 specific suvh4-like 0.0
Internal
biog3_v1.0_unigene17365 biogeco3 v1.0 289
AutoFact: Trypan_PARP multi-domain protein 4.0e-18
unknown
biog3_v1.0_unigene17550 biogeco3 v1.0 300
AutoFact: plastid transcriptionally active 14 protein [Arabidopsis thaliana] gb|AAO42203.1| unknown protein [Arabidopsis thaliana] gb|AAO63895.1| unknown protein [Arabidopsis thaliana] dbj|BAF02014.1| hypothetical protein [Arabidopsis thaliana] gb|AEE84278.1| plast 0.0
Blast2go: ribulose- bisphosphate carboxylase oxygenase large subunit n- chloroplastic-like 0.0
unknown
biog3_v1.0_unigene18161 biogeco3 v1.0 179
AutoFact: SET domain protein n=1 Tax=Populus trichocarpa RepID=B9HHA3_POPTR 0.0
Blast2go: polycomb protein ez1 0.0
unknown
biog3_v1.0_unigene18261 biogeco3 v1.0 312
AutoFact: Trithorax, putative n=1 Tax=Ricinus communis RepID=B9RII0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n-methyltransferase atx4-like 0.0
Putative Complete
biog3_v1.0_unigene19357 biogeco3 v1.0 266
AutoFact: SET domain-containing protein C (Fragment) n=15 Tax=Pinus RepID=B0ZR10_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: set domain-containing protein c 0.0
Internal
biog3_v1.0_unigene19622 biogeco3 v1.0 118
AutoFact: Forever young oxidoreductase n=2 Tax=Solanum RepID=Q8W2K0_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: forever young oxidoreductase 0.0
Internal
biog3_v1.0_unigene20373 biogeco3 v1.0 503
AutoFact: ABC transporter D family member 2, chloroplastic n=2 Tax=Arabidopsis RepID=AB2D_ARATH 3.0e-22
FL-Next: sp=ABC transporter D family member 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter d family member 2 1.50853e-24
Internal
biog3_v1.0_unigene20549 biogeco3 v1.0 342
AutoFact: Phd finger protein, putative n=1 Tax=Ricinus communis RepID=B9SP39_RICCO 3.0e-17
FL-Next: sp=Histone-lysine N-methyltransferase ATX2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: set domain protein 1.17292e-20
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain