Home Assemblies BLAST Search Institutions

• All assemblies
• Assembly info
• Unigenes
• SNPs
• SSRs
• Descriptions
• GOs
• ECs
• KEGGs
• InterPros
• miRNAs

Assembly Name: biogeco3 v1.0

Name: Sec63 domain

Term: IPR004179  

Source: InterPro from Sma3

---

UniGenes with this annotation:

Sequence	Assembly	Length (nt)	Description E-value	Full-Length
biog3_v1.0_unigene1404	biogeco3 v1.0	486	• AutoFact: putative RNA helicase [Arabidopsis thaliana] 0.0 • FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0 • Blast2go: activating signal cointegrator 1 complex subunit 0.0	Internal
biog3_v1.0_unigene4484	biogeco3 v1.0	665	• AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 0.0 • FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0 • Blast2go: u5 small nuclear ribonucleoprotein helicase 0.0	C-terminus
biog3_v1.0_unigene5728	biogeco3 v1.0	1976	• AutoFact: translocation protein SEC63 [Arabidopsis thaliana] ref|NP_001031306.2| translocation protein SEC63 [Arabidopsis thaliana] ref|NP_001117623.1| translocation protein SEC63 [Arabidopsis thaliana] dbj|BAE99700.1| putative DnaJ protein [Arabidopsis thaliana] g 0.0 • FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0 • Blast2go: translocation protein sec63 0.0	N-terminus
biog3_v1.0_unigene16205	biogeco3 v1.0	156	• AutoFact: translocation protein SEC63 [Arabidopsis thaliana] ref|NP_001031306.2| translocation protein SEC63 [Arabidopsis thaliana] ref|NP_001117623.1| translocation protein SEC63 [Arabidopsis thaliana] dbj|BAE99700.1| putative DnaJ protein [Arabidopsis thaliana] g 0.0 • Blast2go: translocation protein sec63 0.0	unknown
biog3_v1.0_unigene17557	biogeco3 v1.0	323	• AutoFact: putative RNA helicase [Arabidopsis thaliana] 0.0 • FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0 • Blast2go: activating signal cointegrator 1 complex subunit 0.0	N-terminus
biog3_v1.0_unigene19783	biogeco3 v1.0	177	• AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 0.0 • FL-Next: tr=U520, putative; Ricinus communis (Castor bean). 0.0 • Blast2go: u5 small nuclear ribonucleoprotein 200 kda helicase 0.0	Internal
biog3_v1.0_unigene21924	biogeco3 v1.0	285	• AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 1.0e-31 • FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0 • Blast2go: u5 small nuclear ribonucleoprotein 200 kda helicase 3.29166e-38	N-terminus
biog3_v1.0_unigene22056	biogeco3 v1.0	279	• AutoFact: U520, putative n=2 Tax=rosids RepID=B9RY79_RICCO 0.0 • FL-Next: tr=U520, putative; Ricinus communis (Castor bean). 0.0 • Blast2go: u5 small nuclear ribonucleoprotein 200 kda helicase 0.0	Internal
biog3_v1.0_unigene22783	biogeco3 v1.0	313	• AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 0.0 • FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0 • Blast2go: u5 small nuclear ribonucleoprotein 200 kda helicase 0.0	Internal
biog3_v1.0_unigene24231	biogeco3 v1.0	314	• AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 0.0 • FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0 • Blast2go: u5 small nuclear ribonucleoprotein 200 kda helicase 0.0	Internal
biog3_v1.0_unigene25185	biogeco3 v1.0	457	• AutoFact: Unassigned protein • FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0 • Blast2go: activating signal cointegrator 1 complex subunit 9.49091e-28	Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain