Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: DNA topoisomerase, type IA

Term: IPR000380  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene4797 biogeco3 v1.0 640
• AutoFact: unconventional myosin [Helianthus annuus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: myosin-h heavy chain-like 0.0
Internal
biog3_v1.0_unigene10476 biogeco3 v1.0 490
• AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 6.0e-26
• FL-Next: sp=DNA topoisomerase; Vitis vinifera (Grape). 0.0
• Blast2go: zinc finger 2.45808e-31
Internal
biog3_v1.0_unigene13336 biogeco3 v1.0 344
• AutoFact: myosin XI [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: myosin-h heavy chain-like 0.0
Internal
biog3_v1.0_unigene13563 biogeco3 v1.0 502
• AutoFact: unconventional myosin [Helianthus annuus] 0.0
• FL-Next: tr=Myosin XI, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: myosin-h heavy chain-like 0.0
Internal
biog3_v1.0_unigene20156 biogeco3 v1.0 344
• AutoFact: Myosin class 11-2 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX0_ADICA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene20617 biogeco3 v1.0 296
• AutoFact: DNA topoisomerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SU60_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
• Blast2go: dna topoisomerase 0.0
Internal
biog3_v1.0_unigene22576 biogeco3 v1.0 254
• AutoFact: Myosin class 11-2 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX0_ADICA 0.0
• FL-Next: tr=Myosin class 11-1; Adiantum capillus-veneris (Maidenhair fern). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene25218 biogeco3 v1.0 238
• AutoFact: Myosin class 11-1 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX1_ADICA 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain