Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Chaperonin ClpA/B, conserved site

Term: IPR018368  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene1428 biogeco3 v1.0 822
• AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
C-terminus
biog3_v1.0_unigene2442 biogeco3 v1.0 367
• AutoFact: Heat shock protein 101 n=20 Tax=Poaceae RepID=HS101_ORYSJ 0.0
• FL-Next: sp=Chaperone protein ClpB1; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: heat shock protein 101 0.0
Internal
biog3_v1.0_unigene4574 biogeco3 v1.0 384
• AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9SJA7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
Internal
biog3_v1.0_unigene5075 biogeco3 v1.0 496
• AutoFact: Heat shock protein 101 n=20 Tax=Poaceae RepID=HS101_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heat shock protein 101 0.0
Internal
biog3_v1.0_unigene7022 biogeco3 v1.0 408
• AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9SJA7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
N-terminus
biog3_v1.0_unigene7228 biogeco3 v1.0 826
• AutoFact: ATP-dependent Clp protease ATP-binding subunit precursor [Oryza sativa Indica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene7522 biogeco3 v1.0 442
• AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9SJA7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
Internal
biog3_v1.0_unigene7756 biogeco3 v1.0 285
• AutoFact: Heat shock protein 101 n=20 Tax=Poaceae RepID=HS101_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heat shock protein 101 0.0
N-terminus
biog3_v1.0_unigene7832 biogeco3 v1.0 446
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
Coding
biog3_v1.0_unigene9664 biogeco3 v1.0 302
• AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum] 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
unknown
biog3_v1.0_unigene9732 biogeco3 v1.0 3252
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
Complete
biog3_v1.0_unigene12238 biogeco3 v1.0 560
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
• FL-Next: sp=Chaperone protein ClpC, chloroplastic; Pisum sativum (Garden pea). 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
Internal
biog3_v1.0_unigene12298 biogeco3 v1.0 1150
• AutoFact: Heat shock protein 101 n=20 Tax=Poaceae RepID=HS101_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heat shock protein 101 0.0
Putative C-terminus
biog3_v1.0_unigene14266 biogeco3 v1.0 437
• AutoFact: ATP-dependent Clp protease ATP-binding subunit precursor [Oryza sativa Indica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene16289 biogeco3 v1.0 232
• AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9RNX1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein mitochondrial-like 0.0
Putative N-terminus
biog3_v1.0_unigene16975 biogeco3 v1.0 249
• AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9RNX1_RICCO 0.0
• Blast2go: chaperone protein mitochondrial-like 0.0
Putative coding
biog3_v1.0_unigene18343 biogeco3 v1.0 200
• AutoFact: Heat shock protein 101 n=20 Tax=Poaceae RepID=HS101_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heat shock protein 101 0.0
Internal
biog3_v1.0_unigene20821 biogeco3 v1.0 149
• AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9RLP7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heat shock protein 0.0
Internal
biog3_v1.0_unigene22179 biogeco3 v1.0 350
• AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9SJA7_RICCO 0.0
• FL-Next: sp=Chaperone protein ClpB3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
Internal
biog3_v1.0_unigene25927 biogeco3 v1.0 292
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic n=1 Tax=Solanum lycopersicum RepID=CLPAA_SOLLC 5.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-dependent protease 3.89307e-34
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain