Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Single-stranded nucleic acid binding R3H

Term: IPR001374  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene15697 biogeco3 v1.0 282
AutoFact: Potassium transporter 9 n=2 Tax=Arabidopsis thaliana RepID=POT9_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 0.0
N-terminus
biog3_v1.0_unigene16789 biogeco3 v1.0 278
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RUB7_RICCO 0.0
Blast2go: high affinity potassium transporter 0.0
unknown
biog3_v1.0_unigene18695 biogeco3 v1.0 245
AutoFact: putative potasium transporter [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Potassium transporter 11; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: potassium transporter 0.0
Internal
biog3_v1.0_unigene18886 biogeco3 v1.0 218
AutoFact: Putative DNA-binding protein n=2 Tax=Arabidopsis thaliana RepID=O81047_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein smubp-2-like 0.0
Internal
biog3_v1.0_unigene19763 biogeco3 v1.0 221
AutoFact: putative stage III sporulation protein AA [Arabidopsis thaliana] dbj|BAF00902.1| hypothetical protein [Arabidopsis thaliana] gb|AEE31582.1| putative stage III sporulation protein AA [Arabidopsis thaliana] 1.0e-26
FL-Next: sp=Uncharacterized protein ycf45; Porphyra purpurea. Plastid; Chloroplast. 0.0
Blast2go: uncharacterized protein ycf45-like 4.74391e-37
Internal
biog3_v1.0_unigene20918 biogeco3 v1.0 211
AutoFact: potassium transporter 1 [Arabidopsis thaliana] sp|O22397.2|POT1_ARATH RecName: Full=Potassium transporter 1; Short=AtKT1; Short=AtKUP1; Short=AtPOT1 gb|AAB87687.1| potassium transporter [Arabidopsis thaliana] gb|AAB88901.1| high-affinity potassium transpo 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 0.0
Internal
biog3_v1.0_unigene22026 biogeco3 v1.0 318
AutoFact: Keratin_B2 domain containing protein 3.0e-05
FL-Next: sp=NF-X1-type zinc finger protein NFXL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nf-x1-type zinc finger protein nfxl1-like 0.0
Internal
biog3_v1.0_unigene22469 biogeco3 v1.0 222
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 5.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: probable atp-dependent rna helicase ythdc2-like 2.25235e-16
Internal
biog3_v1.0_unigene22824 biogeco3 v1.0 201
AutoFact: putative potassium transporter [Oryza sativa Japonica Group] gb|EAZ05084.1| hypothetical protein OsI_27274 [Oryza sativa Indica Group] 0.0
Blast2go: potassium transporter 0.0
unknown
biog3_v1.0_unigene23968 biogeco3 v1.0 248
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] gb|AAK76494.1| putative helicase [Arabidopsis thaliana] gb|AAM15033.1| putative helicase [Arabidopsis thaliana] gb|AAD17447.2| putative helicase [Arabidopsis thaliana] gb|AAM14300.1| putative helicase [A 0.0
FL-Next: tr=DNA-binding protein smubp-2, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna-binding protein smubp-2-like 0.0
Internal
biog3_v1.0_unigene24787 biogeco3 v1.0 182
AutoFact: putative potasium transporter [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Potassium transporter 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: potassium transporter 0.0
Internal
biog3_v1.0_unigene25390 biogeco3 v1.0 436
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
Internal
biog3_v1.0_unigene25747 biogeco3 v1.0 483
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] gb|AED94034.1| putative DNA-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein smubp-2-like 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain