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Assembly Name: biogeco3 v1.0

Name: Ribosomal protein L22/L17, conserved site

Term: IPR018260  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1734 biogeco3 v1.0 904
AutoFact: ribosomal protein [Petunia x hybrida] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l17-2-like 0.0
Complete
biog3_v1.0_unigene7832 biogeco3 v1.0 446
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
Coding
biog3_v1.0_unigene8481 biogeco3 v1.0 653
AutoFact: pfam04389, Peptidase_M28, Peptidase family M28 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zn-dependent exopeptidase-like protein 0.0
Internal
biog3_v1.0_unigene8894 biogeco3 v1.0 481
AutoFact: pfam04389, Peptidase_M28, Peptidase family M28 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zn-dependent exopeptidase-like protein 0.0
Internal
biog3_v1.0_unigene11180 biogeco3 v1.0 385
AutoFact: ribosomal protein [Petunia x hybrida] 0.0
Blast2go: 60s ribosomal protein 0.0
unknown
biog3_v1.0_unigene12103 biogeco3 v1.0 535
AutoFact: ribosomal protein L17-1 [Poa secunda] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l17 0.0
C-terminus
biog3_v1.0_unigene12115 biogeco3 v1.0 351
AutoFact: ribosomal protein [Petunia x hybrida] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein 0.0
N-terminus
biog3_v1.0_unigene12238 biogeco3 v1.0 560
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
FL-Next: sp=Chaperone protein ClpC, chloroplastic; Pisum sativum (Garden pea). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
Internal
biog3_v1.0_unigene21093 biogeco3 v1.0 257
AutoFact: pfam04389, Peptidase_M28, Peptidase family M28 4.99983e-42
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: zn-dependent exopeptidase-like protein 0.0
C-terminus
biog3_v1.0_unigene21692 biogeco3 v1.0 310
AutoFact: pfam04389, Peptidase_M28, Peptidase family M28 4.99983e-42
FL-Next: tr=T1F15.12 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zn-dependent exopeptidase-like protein 0.0
Internal
biog3_v1.0_unigene23839 biogeco3 v1.0 379
AutoFact: pfam04389, Peptidase_M28, Peptidase family M28 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: zn-dependent exopeptidase-like protein 0.0
Internal
biog3_v1.0_unigene23908 biogeco3 v1.0 454
AutoFact: Unassigned protein
FL-Next: sp=Helicase protein MOM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
biog3_v1.0_unigene25653 biogeco3 v1.0 709
AutoFact: ribosomal protein L17-1 [Poa secunda] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l17 0.0
Putative Complete
biog3_v1.0_unigene26245 biogeco3 v1.0 165
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain