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Assembly Name: biogeco3 v1.0

Name: Glycosyl hydrolase, family 13, catalytic domain

Term: IPR006047  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene378 biogeco3 v1.0 256
AutoFact: Alpha-amylase, putative n=1 Tax=Ricinus communis RepID=B9S2B5_RICCO 0.0
Blast2go: alpha-amylase-like 3 0.0
unknown
biog3_v1.0_unigene678 biogeco3 v1.0 528
AutoFact: Isoamylase isoform 3 n=1 Tax=Solanum tuberosum RepID=Q84YG5_SOLTU 0.0
FL-Next: sp=Isoamylase 3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: isoamylase chloroplastic-like 0.0
Internal
biog3_v1.0_unigene761 biogeco3 v1.0 515
AutoFact: alpha-amylase-like 3 [Arabidopsis thaliana] gb|AAK91414.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gb|AAN18209.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gb|AEE34983.1| alpha-amylase-like 3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-amylase isozyme 3d 0.0
Internal
biog3_v1.0_unigene3274 biogeco3 v1.0 1069
AutoFact: Alpha-amylase n=2 Tax=Hordeum vulgare subsp. vulgare RepID=C3W8N1_HORVD 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-amylase-like 2 0.0
Internal
biog3_v1.0_unigene3280 biogeco3 v1.0 389
AutoFact: Alpha-amylase n=2 Tax=Hordeum vulgare subsp. vulgare RepID=C3W8N1_HORVD 0.0
Blast2go: alpha-amylase-like 2 0.0
unknown
biog3_v1.0_unigene5196 biogeco3 v1.0 1793
AutoFact: Starch branching enzyme II-2 n=2 Tax=Malus x domestica RepID=A4GW34_MALDO 0.0
FL-Next: sp=1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic; Zea mays (Maize). 0.0
Blast2go: starch branching enzyme ii 0.0
C-terminus
biog3_v1.0_unigene6423 biogeco3 v1.0 974
AutoFact: 1,4-alpha-glucan branching enzyme (Fragment) n=1 Tax=Solanum tuberosum RepID=O04864_SOLTU 0.0
FL-Next: sp=1,4-alpha-glucan-branching enzyme; Solanum tuberosum (Potato). 0.0
Blast2go: starch branching enzyme 1 0.0
Internal
biog3_v1.0_unigene7054 biogeco3 v1.0 283
AutoFact: Alpha-amylase, putative n=1 Tax=Ricinus communis RepID=B9S2B5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-amylase-like 3 0.0
C-terminus
biog3_v1.0_unigene7542 biogeco3 v1.0 446
AutoFact: alpha-amylase-like 3 [Arabidopsis thaliana] gb|AAK91414.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gb|AAN18209.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gb|AEE34983.1| alpha-amylase-like 3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-amylase isozyme 3d 0.0
Putative C-terminus
biog3_v1.0_unigene9431 biogeco3 v1.0 187
AutoFact: alpha-amylase-like 3 [Arabidopsis thaliana] gb|AAK91414.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gb|AAN18209.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gb|AEE34983.1| alpha-amylase-like 3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Alpha-amylase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: alpha-amylase isozyme 3d 0.0
Internal
biog3_v1.0_unigene10911 biogeco3 v1.0 760
AutoFact: Isoamylase isoform 3 n=1 Tax=Solanum tuberosum RepID=Q84YG5_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: isoamylase chloroplastic-like 0.0
Complete
biog3_v1.0_unigene12195 biogeco3 v1.0 715
AutoFact: starch branching enzyme [Ipomoea batatas] 0.0
FL-Next: sp=1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic; Zea mays (Maize). 0.0
Blast2go: starch branching enzyme ii 0.0
Internal
biog3_v1.0_unigene13641 biogeco3 v1.0 321
AutoFact: starch branching enzyme [Ipomoea batatas] 0.0
FL-Next: sp=1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic; Zea mays (Maize). 0.0
Blast2go: starch branching enzyme ii 0.0
Internal
biog3_v1.0_unigene14924 biogeco3 v1.0 225
AutoFact: Alpha-amylase, putative n=1 Tax=Ricinus communis RepID=B9S2B5_RICCO 0.0
Blast2go: alpha-amylase-like 3 0.0
unknown
biog3_v1.0_unigene15283 biogeco3 v1.0 354
AutoFact: alpha-amylase-like 3 [Arabidopsis thaliana] gb|AAK91414.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gb|AAN18209.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gb|AEE34983.1| alpha-amylase-like 3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Alpha-amylase; Cucumis melo subsp. melo. 0.0
Blast2go: alpha-amylase isozyme 3d 0.0
Internal
biog3_v1.0_unigene15545 biogeco3 v1.0 277
AutoFact: 1,4-alpha-glucan branching enzyme (Fragment) n=1 Tax=Solanum tuberosum RepID=O04864_SOLTU 0.0
Blast2go: starch branching enzyme 1 0.0
unknown
biog3_v1.0_unigene17016 biogeco3 v1.0 266
AutoFact: isoamylase-type starch-debranching enzyme 3 [Phaseolus vulgaris] 1.0e-35
FL-Next: sp=Isoamylase 3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: isoamylase chloroplastic-like 1.85268e-40
Internal
biog3_v1.0_unigene17394 biogeco3 v1.0 301
AutoFact: 1,4-alpha-glucan branching enzyme (Fragment) n=1 Tax=Solanum tuberosum RepID=O04864_SOLTU 0.0
FL-Next: sp=1,4-alpha-glucan-branching enzyme; Solanum tuberosum (Potato). 0.0
Blast2go: starch branching enzyme 1 0.0
Internal
biog3_v1.0_unigene20120 biogeco3 v1.0 239
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070 gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana] gb|AEE28239.1| pentatricopeptide repea 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 5.14557e-42
Internal
biog3_v1.0_unigene20849 biogeco3 v1.0 496
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SS70_RICCO 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain