|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene4490
|
biogeco3 v1.0
|
313
|
|
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene11073
|
biogeco3 v1.0
|
919
|
|
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR
|
0.0
|
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
• Blast2go: rna-directed dna polymerase (reverse transcriptase) chromo zinc cchc-type peptidase active site polynucleotidyl ribonuclease h fold
|
0.0
|
|
Putative Complete
|
|
biog3_v1.0_unigene11408
|
biogeco3 v1.0
|
475
|
|
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene13106
|
biogeco3 v1.0
|
463
|
|
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene16913
|
biogeco3 v1.0
|
361
|
|
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH
|
0.0
|
|
• FL-Next: tr=Gypsy/Ty-3 retroelement polyprotein; 69905-74404; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: retrotransposon protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene17027
|
biogeco3 v1.0
|
154
|
|
• AutoFact: OSJNBa0024J22.19 protein n=2 Tax=Oryza sativa RepID=Q7XRN3_ORYSJ
|
0.0
|
|
• FL-Next: tr=OSJNBa0035O13.13 protein; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene17126
|
biogeco3 v1.0
|
256
|
|
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene18284
|
biogeco3 v1.0
|
364
|
|
• AutoFact: reverse transcriptase [Cycas revoluta]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: reverse transcriptase
|
0.0
|
|
Putative Complete
|
|
biog3_v1.0_unigene19528
|
biogeco3 v1.0
|
260
|
|
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Putative coding
|
|
biog3_v1.0_unigene19793
|
biogeco3 v1.0
|
168
|
|
• AutoFact: Gag-pol polyprotein n=3 Tax=Zea mays RepID=Q8L7J3_MAIZE
|
0.0
|
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene20502
|
biogeco3 v1.0
|
128
|
|
• AutoFact: putative tryptophanyl-tRNA synthetase [Oryza sativa Japonica Group] gb|EAY75781.1| hypothetical protein OsI_03697 [Oryza sativa Indica Group] gb|EAZ13498.1| hypothetical protein OsJ_03415 [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene20786
|
biogeco3 v1.0
|
321
|
|
• AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN
|
2.0e-21
|
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
6.55626e-26
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene21323
|
biogeco3 v1.0
|
296
|
|
• AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558
|
0.0
|
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
• Blast2go: rna-directed dna polymerase (reverse transcriptase)
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene21536
|
biogeco3 v1.0
|
263
|
|
• AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Pinus brutia RepID=Q9M6N4_9CONI
|
5.0e-37
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: pol protein integrase region
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene21729
|
biogeco3 v1.0
|
268
|
|
• AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN
|
1.0e-23
|
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
3.33279e-29
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene23419
|
biogeco3 v1.0
|
367
|
|
• AutoFact: OSJNBa0024J22.19 protein n=2 Tax=Oryza sativa RepID=Q7XRN3_ORYSJ
|
0.0
|
|
• FL-Next: tr=OSJNBa0024J22.19 protein; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: retrotransposon ty3-gypsy subclass
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene24729
|
biogeco3 v1.0
|
560
|
|
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna-directed dna polymerase (reverse transcriptase) chromo zinc cchc-type peptidase active site polynucleotidyl ribonuclease h fold
|
0.0
|
|
Putative Complete
|
