Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: U2 auxiliary factor small subunit

Term: IPR009145  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene2530 biogeco3 v1.0 509
• AutoFact: floral homeotic protein HUA1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger ccch domain-containing protein 37 0.0
Internal
biog3_v1.0_unigene3124 biogeco3 v1.0 779
• AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=2 Tax=rosids RepID=B9R8U8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: splicing factor u2af 38 kda subunit 0.0
Putative C-terminus
biog3_v1.0_unigene4335 biogeco3 v1.0 1677
• AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u2 snrnp auxiliary small 0.0
Complete
biog3_v1.0_unigene6700 biogeco3 v1.0 581
• AutoFact: floral homeotic protein HUA1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger ccch domain-containing protein 37 0.0
Internal
biog3_v1.0_unigene8489 biogeco3 v1.0 203
• AutoFact: floral homeotic protein HUA1 [Arabidopsis thaliana] 0.0
• Blast2go: zinc finger ccch domain-containing protein 37 0.0
Coding
biog3_v1.0_unigene15238 biogeco3 v1.0 403
• AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=2 Tax=rosids RepID=B9R8U8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: splicing factor u2af 38 kda subunit 0.0
Putative Complete
biog3_v1.0_unigene18034 biogeco3 v1.0 355
• AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=2 Tax=rosids RepID=B9R8U8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: splicing factor u2af 38 kda subunit 0.0
Internal
biog3_v1.0_unigene21909 biogeco3 v1.0 147
• AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RT23_RICCO 9.80909e-45
• Blast2go: zinc finger ccch domain-containing protein 32 0.0
unknown
biog3_v1.0_unigene22067 biogeco3 v1.0 224
• AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RT23_RICCO 9.80909e-45
• Blast2go: zinc finger ccch domain-containing protein 32 0.0
unknown
biog3_v1.0_unigene25829 biogeco3 v1.0 489
• AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u2 snrnp auxiliary small 0.0
Internal
biog3_v1.0_unigene26075 biogeco3 v1.0 257
• AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u2 snrnp auxiliary small 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain