Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Helix-loop-helix DNA-binding

Term: IPR011598  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene393 biogeco3 v1.0 782
• AutoFact: APO protein 1 [Arabidopsis thaliana] gb|AEE34293.1| APO protein 1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: apo protein 1 0.0
C-terminus
biog3_v1.0_unigene612 biogeco3 v1.0 337
• AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh62-like 0.0
Internal
biog3_v1.0_unigene621 biogeco3 v1.0 451
• AutoFact: transcription factor FAMA [Arabidopsis thaliana] sp|Q56YJ8.1|FAMA_ARATH RecName: Full=Transcription factor FAMA; AltName: Full=Basic helix-loop-helix protein 97; Short=AtbHLH97; Short=bHLH 97; AltName: Full=Transcription factor EN 14; AltName: Full=bHLH t 6.02558e-44
• Blast2go: transcription factor bhlh96-like 0.0
unknown
biog3_v1.0_unigene833 biogeco3 v1.0 755
• AutoFact: BHLH-like DNA binding protein n=2 Tax=Vitis vinifera RepID=B7SNG3_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor tt8 0.0
Internal
biog3_v1.0_unigene1135 biogeco3 v1.0 365
• AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh62-like 0.0
Putative C-terminus
biog3_v1.0_unigene1140 biogeco3 v1.0 516
• AutoFact: bHLH transcription factor [Arabidopsis thaliana] 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene1368 biogeco3 v1.0 556
• AutoFact: putative transcription factor BHLH10 [Arabidopsis thaliana] gb|AAD20667.1| unknown protein [Arabidopsis thaliana] 4.00001e-40
• FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew). 0.0
• Blast2go: transcription factor bhlh91-like 0.0
Putative C-terminus
biog3_v1.0_unigene1539 biogeco3 v1.0 863
• AutoFact: APO protein 2 [Arabidopsis thaliana] gb|AED96973.1| APO protein 2 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: apo protein 2 0.0
Internal
biog3_v1.0_unigene1784 biogeco3 v1.0 452
• AutoFact: transcription factor FAMA [Arabidopsis thaliana] sp|Q56YJ8.1|FAMA_ARATH RecName: Full=Transcription factor FAMA; AltName: Full=Basic helix-loop-helix protein 97; Short=AtbHLH97; Short=bHLH 97; AltName: Full=Transcription factor EN 14; AltName: Full=bHLH t 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh96-like 0.0
N-terminus
biog3_v1.0_unigene1824 biogeco3 v1.0 448
• AutoFact: Helix-loop-helix protein 1A n=1 Tax=Pinus taeda RepID=Q9SQ79_PINTA 0.0
• FL-Next: tr=Helix-loop-helix protein 1A; Pinus taeda (Loblolly pine). 0.0
• Blast2go: transcription factor bhlh130-like 0.0
Internal
biog3_v1.0_unigene2064 biogeco3 v1.0 410
• AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MK24_9ASPA 8.0e-36
• Blast2go: transcription factor bhlh121-like 6.02558e-44
Putative coding
biog3_v1.0_unigene2281 biogeco3 v1.0 287
• AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: bhlh transcription factor 0.0
Putative C-terminus
biog3_v1.0_unigene2379 biogeco3 v1.0 322
• AutoFact: phaseolin G-box binding protein PG2 [Phaseolus vulgaris] 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor 0.0
C-terminus
biog3_v1.0_unigene2630 biogeco3 v1.0 428
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
biog3_v1.0_unigene3184 biogeco3 v1.0 453
• AutoFact: basic helix-loop-helix (bHLH) family transcription factor [Brassica oleracea] 8.0e-17
• Blast2go: protein 2.15029e-21
Coding
biog3_v1.0_unigene3615 biogeco3 v1.0 465
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RRL5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh62-like 0.0
C-terminus
biog3_v1.0_unigene3816 biogeco3 v1.0 839
• AutoFact: BHLH-like DNA binding protein n=2 Tax=Vitis vinifera RepID=B7SNG3_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor tt8 0.0
C-terminus
biog3_v1.0_unigene4079 biogeco3 v1.0 705
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh113-like 0.0
C-terminus
biog3_v1.0_unigene4230 biogeco3 v1.0 705
• AutoFact: Helix-loop-helix DNA-binding n=2 Tax=Medicago truncatula RepID=Q2HVX8_MEDTR 0.0
• FL-Next: sp=Uncharacterized basic helix-loop-helix protein At1g06150; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene4689 biogeco3 v1.0 287
• AutoFact: transcription factor FAMA [Arabidopsis thaliana] sp|Q56YJ8.1|FAMA_ARATH RecName: Full=Transcription factor FAMA; AltName: Full=Basic helix-loop-helix protein 97; Short=AtbHLH97; Short=bHLH 97; AltName: Full=Transcription factor EN 14; AltName: Full=bHLH t 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh96-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain