Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: Transcription factor, TCP

Term: IPR005333  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene707 biogeco3 v1.0 677
• AutoFact: transcription factor TCP4 [Arabidopsis thaliana] ref|NP_850589.1| transcription factor TCP4 [Arabidopsis thaliana] ref|NP_001189896.1| transcription factor TCP4 [Arabidopsis thaliana] sp|Q8LPR5.1|TCP4_ARATH RecName: Full=Transcription factor TCP4; AltName 9.0e-34
• Blast2go: transcription factor tcp4 4.49701e-39
Putative coding
biog3_v1.0_unigene1196 biogeco3 v1.0 423
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TKA8_VITVI 2.0e-25
• Blast2go: tb1-like tcp family transcription factor 3.45064e-29
unknown
biog3_v1.0_unigene3262 biogeco3 v1.0 366
• AutoFact: TCP-domain protein n=6 Tax=Andropogoneae RepID=B6SIN5_MAIZE 1.0e-23
• Blast2go: transcription factor pcf2 0.0
unknown
biog3_v1.0_unigene14955 biogeco3 v1.0 621
• AutoFact: transcription factor TCP4 [Arabidopsis thaliana] ref|NP_850589.1| transcription factor TCP4 [Arabidopsis thaliana] ref|NP_001189896.1| transcription factor TCP4 [Arabidopsis thaliana] sp|Q8LPR5.1|TCP4_ARATH RecName: Full=Transcription factor TCP4; AltName 9.0e-34
• Blast2go: transcription factor tcp4 4.49701e-39
unknown
biog3_v1.0_unigene19982 biogeco3 v1.0 192
• AutoFact: transcription factor TCP4 [Arabidopsis thaliana] ref|NP_850589.1| transcription factor TCP4 [Arabidopsis thaliana] ref|NP_001189896.1| transcription factor TCP4 [Arabidopsis thaliana] sp|Q8LPR5.1|TCP4_ARATH RecName: Full=Transcription factor TCP4; AltName 9.0e-34
• Blast2go: transcription factor tcp4 4.49701e-39
unknown
biog3_v1.0_unigene21237 biogeco3 v1.0 235
• AutoFact: Unassigned protein
• Blast2go: tcp transcription factor 11 2.67724e-22
unknown
biog3_v1.0_unigene22166 biogeco3 v1.0 368
• AutoFact: transcription factor TCP8 [Arabidopsis thaliana] sp|Q9C518.1|TCP8_ARATH RecName: Full=Transcription factor TCP8 gb|AAG50694.1|AC079604_1 auxin-induced basic helix-loop-helix transcription factor, putative [Arabidopsis thaliana] gb|AAG50759.1|AC079131_4 au 8.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.09954e-36
Internal
biog3_v1.0_unigene22191 biogeco3 v1.0 173
• AutoFact: TB1-like TCP family transcription factor (Fragment) n=67 Tax=Helianthus RepID=F5AIS2_HELAN 4.0e-17
• Blast2go: tb1-like tcp family transcription factor 1.53462e-21
unknown

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain