Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Zinc finger, GATA-type

Term: IPR000679  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene992 biogeco3 v1.0 987
AutoFact: GATA transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RQG2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene1596 biogeco3 v1.0 805
AutoFact: GATA transcription factor 21 [Arabidopsis thaliana] sp|Q5HZ36.2|GAT21_ARATH RecName: Full=GATA transcription factor 21 dbj|BAA97205.1| unnamed protein product [Arabidopsis thaliana] gb|ABG25059.1| At5g56860 [Arabidopsis thaliana] gb|AED96815.1| GATA trans 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gata transcription factor 5.90279e-16
Internal
biog3_v1.0_unigene1782 biogeco3 v1.0 1155
AutoFact: ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12-like 0.0
C-terminus
biog3_v1.0_unigene2435 biogeco3 v1.0 426
AutoFact: GATA transcription factor 21 [Arabidopsis thaliana] sp|Q5HZ36.2|GAT21_ARATH RecName: Full=GATA transcription factor 21 dbj|BAA97205.1| unnamed protein product [Arabidopsis thaliana] gb|ABG25059.1| At5g56860 [Arabidopsis thaliana] gb|AED96815.1| GATA trans 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gata transcription factor 22-like 0.0
C-terminus
biog3_v1.0_unigene2529 biogeco3 v1.0 466
AutoFact: Lysine-specific histone demethylase, putative n=1 Tax=Ricinus communis RepID=B9R844_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysine-specific histone demethylase-like protein 0.0
N-terminus
biog3_v1.0_unigene2547 biogeco3 v1.0 588
AutoFact: GATA transcription factor 12 [Arabidopsis thaliana] sp|P69781.1|GAT12_ARATH RecName: Full=GATA transcription factor 12 dbj|BAH30596.1| hypothetical protein [Arabidopsis thaliana] gb|AED93492.1| GATA transcription factor 12 [Arabidopsis thaliana] 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gata transcription factor 0.0
C-terminus
biog3_v1.0_unigene2651 biogeco3 v1.0 380
AutoFact: Noc2p family protein [Arabidopsis thaliana] dbj|BAE98878.1| hypothetical protein [Arabidopsis thaliana] gb|AEE79394.1| Noc2p family protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Nucleolar complex protein 2 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nucleolar complex protein 2 homolog 0.0
Internal
biog3_v1.0_unigene3936 biogeco3 v1.0 412
AutoFact: CM0545.290.nc protein n=1 Tax=Lotus japonicus RepID=B0BLB2_LOTJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
biog3_v1.0_unigene4049 biogeco3 v1.0 232
AutoFact: AG-motif binding protein-4 [Nicotiana tabacum] 8.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gata binding protein 1 0.0
Putative N-terminus
biog3_v1.0_unigene4643 biogeco3 v1.0 1166
AutoFact: CM0545.290.nc protein n=1 Tax=Lotus japonicus RepID=B0BLB2_LOTJA 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
biog3_v1.0_unigene6271 biogeco3 v1.0 858
AutoFact: CM0545.290.nc protein n=1 Tax=Lotus japonicus RepID=B0BLB2_LOTJA 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
biog3_v1.0_unigene6498 biogeco3 v1.0 662
AutoFact: structural maintenance of chromosomes 5 [Arabidopsis thaliana] emb|CAC01791.1| putative protein [Arabidopsis thaliana] gb|AED92224.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein F1N13_60; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: structural maintenance of chromosomes 5 0.0
Internal
biog3_v1.0_unigene6596 biogeco3 v1.0 346
AutoFact: CM0545.290.nc protein n=1 Tax=Lotus japonicus RepID=B0BLB2_LOTJA 0.0
FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 0.0
Internal
biog3_v1.0_unigene6839 biogeco3 v1.0 296
AutoFact: Peroxidase 31, putative n=1 Tax=Ricinus communis RepID=B9RUF4_RICCO 0.0
FL-Next: sp=Nucleolar complex protein 2 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nucleolar complex protein 2 homolog 0.0
Internal
biog3_v1.0_unigene6972 biogeco3 v1.0 1133
AutoFact: ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AED91040.1| ubiq 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12-like 0.0
C-terminus
biog3_v1.0_unigene7103 biogeco3 v1.0 666
AutoFact: CM0545.290.nc protein n=1 Tax=Lotus japonicus RepID=B0BLB2_LOTJA 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
biog3_v1.0_unigene8140 biogeco3 v1.0 1027
AutoFact: putative ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12-like 0.0
C-terminus
biog3_v1.0_unigene8288 biogeco3 v1.0 265
AutoFact: CM0545.290.nc protein n=1 Tax=Lotus japonicus RepID=B0BLB2_LOTJA 0.0
Coding
biog3_v1.0_unigene8719 biogeco3 v1.0 277
AutoFact: putative ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12-like 0.0
Internal
biog3_v1.0_unigene9381 biogeco3 v1.0 292
AutoFact: GATA transcription factor 12 [Arabidopsis thaliana] sp|P69781.1|GAT12_ARATH RecName: Full=GATA transcription factor 12 dbj|BAH30596.1| hypothetical protein [Arabidopsis thaliana] gb|AED93492.1| GATA transcription factor 12 [Arabidopsis thaliana] 9.99995e-41
Blast2go: gata transcription factor 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain