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Assembly Name: biogeco3 v1.0

Name: CCAAT-binding transcription factor, subunit B

Term: IPR001289  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene931 biogeco3 v1.0 344
AutoFact: GK15001 gene product from transcript GK15001-RA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_037436 [Vitis vinifera] 0.0
Internal
biog3_v1.0_unigene2881 biogeco3 v1.0 1071
AutoFact: nuclear transcription factor Y subunit A-7 [Arabidopsis thaliana] gb|AEE31233.1| nuclear transcription factor Y subunit A-7 [Arabidopsis thaliana] 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene3103 biogeco3 v1.0 2168
AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit a-9-like 0.0
Complete
biog3_v1.0_unigene8963 biogeco3 v1.0 422
AutoFact: CCAAT-binding transcription factor [Medicago truncatula] 6.0e-35
Blast2go: nuclear transcription factor y subunit a-1 0.0
Coding
biog3_v1.0_unigene10135 biogeco3 v1.0 617
AutoFact: Contains similarity to gb|Y13720 Hap2a transcription factor from Arabidopsis thaliana 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit a-7-like isoform 1 0.0
C-terminus
biog3_v1.0_unigene10336 biogeco3 v1.0 358
AutoFact: CCAAT-binding transcription factor [Medicago truncatula] 6.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit a-1 0.0
Internal
biog3_v1.0_unigene13086 biogeco3 v1.0 1245
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
C-terminus
biog3_v1.0_unigene13615 biogeco3 v1.0 327
AutoFact: GK15001 gene product from transcript GK15001-RA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_037436 [Vitis vinifera] 0.0
Internal
biog3_v1.0_unigene15421 biogeco3 v1.0 285
AutoFact: CCAAT-binding transcription factor [Medicago truncatula] 6.0e-35
Blast2go: nuclear transcription factor y subunit a-1 0.0
Coding
biog3_v1.0_unigene16502 biogeco3 v1.0 164
AutoFact: CCAAT-binding transcription factor [Medicago truncatula] 6.0e-35
Blast2go: nuclear transcription factor y subunit a-1 0.0
unknown
biog3_v1.0_unigene17018 biogeco3 v1.0 255
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 9.14996e-39
N-terminus
biog3_v1.0_unigene17048 biogeco3 v1.0 500
AutoFact: GK15001 gene product from transcript GK15001-RA 0.0
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: hypothetical protein VITISV_037436 [Vitis vinifera] 0.0
Internal
biog3_v1.0_unigene18280 biogeco3 v1.0 230
AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 3.0e-40
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene18432 biogeco3 v1.0 321
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q4JQ46_CYCRE 3.0e-24
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: reverse transcriptase 1.49367e-26
Internal
biog3_v1.0_unigene18501 biogeco3 v1.0 116
AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 9.0e-29
Blast2go: nuclear transcription factor y subunit a-9-like 0.0
unknown
biog3_v1.0_unigene19061 biogeco3 v1.0 368
AutoFact: CCAAT-binding transcription factor [Medicago truncatula] 6.0e-35
Blast2go: nuclear transcription factor y subunit a-1 0.0
unknown
biog3_v1.0_unigene20962 biogeco3 v1.0 202
AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 3.0e-40
Blast2go: protein 0.0
Coding
biog3_v1.0_unigene21021 biogeco3 v1.0 241
AutoFact: CCAAT-binding transcription factor [Medicago truncatula] 6.0e-35
Blast2go: nuclear transcription factor y subunit a-1 0.0
unknown
biog3_v1.0_unigene24027 biogeco3 v1.0 266
AutoFact: Contains similarity to gb|Y13720 Hap2a transcription factor from Arabidopsis thaliana 1.0e-30
Blast2go: nuclear transcription factor y subunit a-7-like isoform 1 0.0
unknown
biog3_v1.0_unigene24401 biogeco3 v1.0 284
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 8.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon ty1-copia subclass 3.41527e-26
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain