Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Zinc finger, LIM-type

Term: IPR001781  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene618 biogeco3 v1.0 747
AutoFact: similar to zinc ion binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc ion binding 0.0
Internal
biog3_v1.0_unigene2135 biogeco3 v1.0 1216
AutoFact: putative pollen specific LIM domain-containing protein [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pollen-specific protein 0.0
Complete
biog3_v1.0_unigene4250 biogeco3 v1.0 1661
AutoFact: LIM domain containing protein-like n=4 Tax=Oryza sativa RepID=Q5SMM0_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc ion binding 0.0
C-terminus
biog3_v1.0_unigene4780 biogeco3 v1.0 598
AutoFact: metallophosphoesterase [Anabaena variabilis ATCC 29413] gb|ABA21612.1| Metallophosphoesterase [Anabaena variabilis ATCC 29413] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: metallophosphatase domain-containing protein 0.0
Internal
biog3_v1.0_unigene4857 biogeco3 v1.0 437
AutoFact: WS02840.CR_K08 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS02840_K08 3', mRNA sequence. 0.0
FL-Next: sp=BTB/POZ domain-containing protein At2g13690; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene5360 biogeco3 v1.0 1293
AutoFact: Lim domain protein n=2 Tax=Pinaceae RepID=F4MKL9_PINPS 0.0
FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: gata type zinc finger transcription factor-like protein 0.0
Complete
biog3_v1.0_unigene6306 biogeco3 v1.0 1265
AutoFact: LIM domain protein WLIM-1 [Helianthus annuus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pollen-specific protein 0.0
Complete
biog3_v1.0_unigene6776 biogeco3 v1.0 461
AutoFact: Unassigned protein
FL-Next: sp=BTB/POZ domain-containing protein At5g60050; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene11872 biogeco3 v1.0 289
AutoFact: similar to zinc ion binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc ion binding 0.0
C-terminus
biog3_v1.0_unigene13896 biogeco3 v1.0 468
AutoFact: LIM domain containing protein-like n=4 Tax=Oryza sativa RepID=Q5SMM0_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc ion binding 0.0
N-terminus
biog3_v1.0_unigene23753 biogeco3 v1.0 220
AutoFact: similar to zinc ion binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc ion binding 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain