Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene9 biogeco3 v1.0 290
AutoFact: RNA-binding protein MEI2, putative; 36123-32976 [Arabidopsis thaliana] 0.0
Blast2go: protein mei2-like 2-like 0.0
unknown
biog3_v1.0_unigene62 biogeco3 v1.0 332
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta chain 0.0
Internal
biog3_v1.0_unigene85 biogeco3 v1.0 307
AutoFact: Multicopper oxidase, putative n=1 Tax=Ricinus communis RepID=B9RXJ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-ascorbate oxidase homolog 0.0
Internal
biog3_v1.0_unigene289 biogeco3 v1.0 930
AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 0.0
C-terminus
biog3_v1.0_unigene295 biogeco3 v1.0 264
AutoFact: MEI2-like protein 4 [Arabidopsis thaliana] sp|Q9LYN7.1|AML4_ARATH RecName: Full=Protein MEI2-like 4; Short=AML4; AltName: Full=MEI2-like protein 4 emb|CAB87285.1| Mei2-like protein [Arabidopsis thaliana] dbj|BAE99028.1| Mei2-like protein [Arabidopsis thal 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein mei2-like 4-like 0.0
Internal
biog3_v1.0_unigene390 biogeco3 v1.0 709
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RZ39_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
Putative C-terminus
biog3_v1.0_unigene470 biogeco3 v1.0 419
AutoFact: diacylglycerol kinase [Arabidopsis thaliana] 0.0
FL-Next: sp=Diacylglycerol kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: diacylglycerol kinase 0.0
C-terminus
biog3_v1.0_unigene501 biogeco3 v1.0 725
AutoFact: phosphatidylserine synthase 2 [Arabidopsis thaliana] gb|AEE29265.1| phosphatidylserine synthase 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: phosphatidylserine synthase 2 0.0
Internal
biog3_v1.0_unigene719 biogeco3 v1.0 381
AutoFact: Unassigned protein
FL-Next: tr=Os09g0488700 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene782 biogeco3 v1.0 442
AutoFact: copper-transporting P-type ATPase [Brassica napus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copper-transporting atpase ran1-like isoform 1 0.0
Internal
biog3_v1.0_unigene789 biogeco3 v1.0 899
AutoFact: leucine-rich repeat receptor-like kinase [Ipomoea batatas] 0.0
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Pinus massoniana. 0.0
Blast2go: brassinosteroid insensitive 1-associated receptor kinase 1 0.0
C-terminus
biog3_v1.0_unigene929 biogeco3 v1.0 495
AutoFact: Os01g0109700 protein (Fragment) n=6 Tax=Oryza sativa RepID=Q0JRB9_ORYSJ 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sin3 histone deacetylase complex 0.0
Internal
biog3_v1.0_unigene1190 biogeco3 v1.0 589
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
Blast2go: protein 0.0
Coding
biog3_v1.0_unigene1527 biogeco3 v1.0 451
AutoFact: phosphatidylserine synthase 2 [Arabidopsis thaliana] gb|AEE29265.1| phosphatidylserine synthase 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Phosphatidylserine synthase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: phosphatidylserine synthase 2 0.0
Putative C-terminus
biog3_v1.0_unigene1668 biogeco3 v1.0 513
AutoFact: Phosphoinositide phosphatase family protein [Arabidopsis thaliana] gb|AAP49837.1| SAC domain protein 4 [Arabidopsis thaliana] gb|AED92896.1| Phosphoinositide phosphatase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphoinositide phosphatase family protein 0.0
Internal
biog3_v1.0_unigene1716 biogeco3 v1.0 403
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene1867 biogeco3 v1.0 353
AutoFact: diacylglycerol kinase [Arabidopsis thaliana] 2.0e-39
FL-Next: sp=Diacylglycerol kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: diacylglycerol kinase 0.0
Internal
biog3_v1.0_unigene2027 biogeco3 v1.0 521
AutoFact: Multicopper oxidase, putative n=1 Tax=Ricinus communis RepID=B9RXJ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-ascorbate oxidase-like protein 0.0
Internal
biog3_v1.0_unigene2081 biogeco3 v1.0 449
AutoFact: Multicopper oxidase, type 1 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-ascorbate oxidase-like protein 0.0
Internal
biog3_v1.0_unigene2124 biogeco3 v1.0 722
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain