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Assembly Name: biogeco3 v1.0

Name: Histone core

Term: IPR007125  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene612 biogeco3 v1.0 337
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh62-like 0.0
Internal
biog3_v1.0_unigene711 biogeco3 v1.0 660
AutoFact: Histone H2B.2 n=33 Tax=Spermatophyta RepID=H2B2_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
C-terminus
biog3_v1.0_unigene1135 biogeco3 v1.0 365
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh62-like 0.0
Putative C-terminus
biog3_v1.0_unigene1137 biogeco3 v1.0 751
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2 0.0
Complete
biog3_v1.0_unigene1615 biogeco3 v1.0 181
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 2.0e-36
Blast2go: histone h2a 1.71538e-38
unknown
biog3_v1.0_unigene2281 biogeco3 v1.0 287
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bhlh transcription factor 0.0
Putative C-terminus
biog3_v1.0_unigene2415 biogeco3 v1.0 281
AutoFact: Histone H3 n=2 Tax=Pediculus humanus corporis RepID=E0V960_PEDHC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h3 0.0
N-terminus
biog3_v1.0_unigene2495 biogeco3 v1.0 139
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 1.99993e-41
Blast2go: histone h2 0.0
unknown
biog3_v1.0_unigene2964 biogeco3 v1.0 308
AutoFact: histone H4 [Hyacinthus orientalis] 9.0e-33
Blast2go: histone h4 4.95499e-42
unknown
biog3_v1.0_unigene3522 biogeco3 v1.0 815
AutoFact: PREDICTED: similar to Late histone H2A.2.2 n=2 Tax=Hydra magnipapillata RepID=UPI0001924B8D 3.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 0.0
Complete
biog3_v1.0_unigene4921 biogeco3 v1.0 371
AutoFact: Histone H3 n=1 Tax=Ostreococcus tauri RepID=Q018N5_OSTTA 0.0
Blast2go: histone h3 0.0
unknown
biog3_v1.0_unigene5438 biogeco3 v1.0 417
AutoFact: Histone H2A n=2 Tax=Picea sitchensis RepID=A9NQY2_PICSI 7.0e-32
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 6.58494e-39
N-terminus
biog3_v1.0_unigene5605 biogeco3 v1.0 403
AutoFact: Histone H2A n=2 Tax=Picea sitchensis RepID=A9NQY2_PICSI 7.0e-32
Blast2go: histone h2a 6.58494e-39
Putative coding
biog3_v1.0_unigene5929 biogeco3 v1.0 676
AutoFact: histone H4 [Hyacinthus orientalis] 5.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
biog3_v1.0_unigene6105 biogeco3 v1.0 1234
AutoFact: Transcription factor bHLH62 n=1 Tax=Arabidopsis thaliana RepID=BH062_ARATH 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bpe 0.0
Complete
biog3_v1.0_unigene6277 biogeco3 v1.0 187
AutoFact: Histone H2A.6 n=6 Tax=Spermatophyta RepID=H2A6_ARATH 7.0e-35
Blast2go: histone h2a-like protein 1.96182e-44
unknown
biog3_v1.0_unigene6443 biogeco3 v1.0 630
AutoFact: Histone H2A.6 n=6 Tax=Spermatophyta RepID=H2A6_ARATH 7.0e-35
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 1.96182e-44
Complete
biog3_v1.0_unigene6809 biogeco3 v1.0 714
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 2.0e-36
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.71538e-38
Complete
biog3_v1.0_unigene7067 biogeco3 v1.0 433
AutoFact: Histone H3 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U534_PHYPA 2.0e-24
FL-Next: tr=Histone 3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: cenh3 1.87561e-29
C-terminus
biog3_v1.0_unigene7993 biogeco3 v1.0 283
AutoFact: histone H4 [Hyacinthus orientalis] 1.0e-35
Blast2go: histone h4 1.12104e-44
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain