Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Endonuclease/exonuclease/phosphatase

Term: IPR005135  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene189 biogeco3 v1.0 609
AutoFact: oligopeptidase B [Arabidopsis thaliana] gb|AAD50051.1|AC007980_16 Similar to oligopeptidases [Arabidopsis thaliana] gb|AAL84967.1| At1g50380/F14I3_27 [Arabidopsis thaliana] gb|AEE32542.1| oligopeptidase B [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: oligopeptidase b 0.0
C-terminus
biog3_v1.0_unigene292 biogeco3 v1.0 1069
AutoFact: carbon catabolite repressor protein 4-like 2 [Arabidopsis thaliana] sp|Q9M2F8.2|CCR4B_ARATH RecName: Full=Carbon catabolite repressor protein 4 homolog 2; Short=CCR4 homolog 2 gb|AEE79801.1| carbon catabolite repressor protein 4-like 2 [Arabidopsis thalia 0.0
FL-Next: sp=Carbon catabolite repressor protein 4 homolog 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: endonuclease exonuclease phosphatase family expressed 0.0
N-terminus
biog3_v1.0_unigene371 biogeco3 v1.0 417
AutoFact: Unassigned protein
Blast2go: protein 0.0
Coding
biog3_v1.0_unigene514 biogeco3 v1.0 714
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
biog3_v1.0_unigene766 biogeco3 v1.0 759
AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
N-terminus
biog3_v1.0_unigene845 biogeco3 v1.0 1082
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ricinus communis RepID=B9SWA7_RICCO 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 5-like 0.0
Internal
biog3_v1.0_unigene926 biogeco3 v1.0 962
AutoFact: Vacuolar sorting protein 39 [Arabidopsis thaliana] gb|AAM20730.1| unknown protein [Arabidopsis thaliana] gb|AEE86679.1| Vacuolar sorting protein 39 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: vam6 vps39-like 0.0
Internal
biog3_v1.0_unigene1024 biogeco3 v1.0 909
AutoFact: cullin-associated NEDD8-dissociated protein 1 [Arabidopsis thaliana] sp|Q8L5Y6.1|CAND1_ARATH RecName: Full=Cullin-associated NEDD8-dissociated protein 1; AltName: Full=Cullin-associated and neddylation-dissociated protein 1; Short=AtCAND1; AltName: Full=P 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene1190 biogeco3 v1.0 589
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
Blast2go: protein 0.0
Coding
biog3_v1.0_unigene1404 biogeco3 v1.0 486
AutoFact: putative RNA helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: activating signal cointegrator 1 complex subunit 0.0
Internal
biog3_v1.0_unigene1584 biogeco3 v1.0 481
AutoFact: WS0383.C21_J13 SS-B-23 Picea sitchensis cDNA clone WS0383_J13 3', mRNA sequence. 0.0
FL-Next: sp=Nuclear cap-binding protein subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: nuclear cap-binding protein 0.0
Internal
biog3_v1.0_unigene1716 biogeco3 v1.0 403
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene1828 biogeco3 v1.0 653
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
biog3_v1.0_unigene1855 biogeco3 v1.0 548
AutoFact: octicosapeptide/Phox/Bem1p domain-containing protein kinase [Arabidopsis thaliana] emb|CAB51173.1| putative protein [Arabidopsis thaliana] gb|AEE78220.1| octicosapeptide/Phox/Bem1p domain-containing protein kinase [Arabidopsis thaliana] 6.0e-35
Blast2go: serine threonine protein 2.8026e-44
Coding
biog3_v1.0_unigene1974 biogeco3 v1.0 1230
AutoFact: cysteine proteinase-like protein [Arabidopsis thaliana] gb|AAF14829.1|AC011664_11 unknown protein [Arabidopsis thaliana] gb|AAS76700.1| At3g02070 [Arabidopsis thaliana] gb|AAS92324.1| At3g02070 [Arabidopsis thaliana] dbj|BAH20151.1| AT3G02070 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: otu domain-containing protein ddb_g0284757-like 0.0
Putative Complete
biog3_v1.0_unigene2124 biogeco3 v1.0 722
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene2213 biogeco3 v1.0 453
AutoFact: putative casein kinase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: casein kinase 0.0
Putative C-terminus
biog3_v1.0_unigene2509 biogeco3 v1.0 664
AutoFact: FAD/NAD(P)-binding oxidoreductase domain-containing protein [Arabidopsis thaliana] gb|AAF04895.1|AC011437_10 unknown protein [Arabidopsis thaliana] gb|AAK91359.1| AT3g04650/F7O18_13 [Arabidopsis thaliana] gb|AAO42761.1| At3g04650/F7O18_13 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: fad nad -binding oxidoreductase domain-containing protein 0.0
Putative N-terminus
biog3_v1.0_unigene2518 biogeco3 v1.0 628
AutoFact: octicosapeptide/Phox/Bem1p domain-containing protein kinase [Arabidopsis thaliana] emb|CAB51173.1| putative protein [Arabidopsis thaliana] gb|AEE78220.1| octicosapeptide/Phox/Bem1p domain-containing protein kinase [Arabidopsis thaliana] 6.0e-35
Blast2go: serine threonine protein 2.8026e-44
Coding
biog3_v1.0_unigene2658 biogeco3 v1.0 1172
AutoFact: WS0383.C21_J13 SS-B-23 Picea sitchensis cDNA clone WS0383_J13 3', mRNA sequence. 0.0
FL-Next: sp=Nuclear cap-binding protein subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: nuclear cap-binding protein 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain