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Assembly Name: biogeco3 v1.0

Name: Endonuclease/exonuclease/phosphatase

Term: IPR005135  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene2860 biogeco3 v1.0 447
AutoFact: calcium-binding endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gb|AAO00857.1| putative protein [Arabidopsis thaliana] gb|AAP31919.1| At5g54130 [Arabidopsis thaliana] dbj|BAD44061.1| putative protein [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized calcium-binding protein at1g02270-like 0.0
Internal
biog3_v1.0_unigene3366 biogeco3 v1.0 413
AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
Internal
biog3_v1.0_unigene3468 biogeco3 v1.0 219
AutoFact: [L] COG0708 Exonuclease III 0.0
FL-Next: sp=Apurinic endonuclease-redox protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: apurinic endonuclease-redox protein 0.0
Internal
biog3_v1.0_unigene3532 biogeco3 v1.0 416
AutoFact: HECT; Ubiquitin [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase upl5 0.0
C-terminus
biog3_v1.0_unigene3791 biogeco3 v1.0 357
AutoFact: UDP-glucose:glycoprotein glucosyltransferase n=3 Tax=Arabidopsis RepID=F4I8G1_ARATH 0.0
FL-Next: sp=UDP-glucose:glycoprotein glucosyltransferase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: udp-glucose:glycoprotein glucosyltransferase 0.0
Internal
biog3_v1.0_unigene4076 biogeco3 v1.0 193
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene4117 biogeco3 v1.0 386
AutoFact: oxidoreductase [Arabidopsis thaliana] ref|NP_001078177.1| oxidoreductase [Arabidopsis thaliana] gb|AAK62416.1|AF386971_1 Unknown protein [Arabidopsis thaliana] dbj|BAB02034.1| unnamed protein product [Arabidopsis thaliana] gb|AAP37844.1| At3g18210 [Arabid 0.0
FL-Next: sp=Uncharacterized PKHD-type hydroxylase At1g22950; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized pkhd-type hydroxylase at1g22950-like 0.0
Internal
biog3_v1.0_unigene4131 biogeco3 v1.0 1097
AutoFact: Trehalose 6-phosphate synthase n=3 Tax=Solanaceae RepID=D4QAK4_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trehalose-phosphate synthase 0.0
Putative Complete
biog3_v1.0_unigene4331 biogeco3 v1.0 446
AutoFact: Unassigned protein
Blast2go: sdl-1 protein 0.0
Putative coding
biog3_v1.0_unigene4369 biogeco3 v1.0 229
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna mismatch repair protein 0.0
N-terminus
biog3_v1.0_unigene4542 biogeco3 v1.0 313
AutoFact: UDP-glucose:glycoprotein glucosyltransferase n=3 Tax=Arabidopsis RepID=F4I8G1_ARATH 0.0
FL-Next: sp=UDP-glucose:glycoprotein glucosyltransferase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: udp-glucose:glycoprotein glucosyltransferase 0.0
Internal
biog3_v1.0_unigene4572 biogeco3 v1.0 386
AutoFact: Ran GTPase binding protein, putative n=1 Tax=Ricinus communis RepID=B9SJF7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ran gtpase binding 0.0
Putative Complete
biog3_v1.0_unigene4883 biogeco3 v1.0 301
AutoFact: Trehalose-6-phosphate synthase, putative n=1 Tax=Ricinus communis RepID=B9SZ18_RICCO 0.0
FL-Next: sp=Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: trehalose-6-phosphate synthase 0.0
Internal
biog3_v1.0_unigene4885 biogeco3 v1.0 405
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 0.0
FL-Next: sp=DNA topoisomerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna topoisomerase i 0.0
C-terminus
biog3_v1.0_unigene4901 biogeco3 v1.0 345
AutoFact: UDP-glucose:glycoprotein glucosyltransferase n=3 Tax=Arabidopsis RepID=F4I8G1_ARATH 0.0
FL-Next: sp=UDP-glucose:glycoprotein glucosyltransferase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: udp-glucose:glycoprotein glucosyltransferase 0.0
Internal
biog3_v1.0_unigene4912 biogeco3 v1.0 818
AutoFact: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTL0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calmodulin binding 0.0
Putative Complete
biog3_v1.0_unigene5011 biogeco3 v1.0 486
AutoFact: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTL0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: calmodulin binding 0.0
N-terminus
biog3_v1.0_unigene5057 biogeco3 v1.0 511
AutoFact: Transitional endoplasmic reticulum ATPase-like n=3 Tax=Oryza sativa RepID=Q6YUV9_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: p-loop containing ntpase domain-containing protein 0.0
Internal
biog3_v1.0_unigene5090 biogeco3 v1.0 450
AutoFact: ap endonuclease, putative (EC:4.2.99.18); K01142 exodeoxyribonuclease III [EC:3.1.11.2] 6.0e-12
FL-Next: sp=Apurinic endonuclease-redox protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: apurinic endonuclease-redox protein 1.67927e-16
Internal
biog3_v1.0_unigene5543 biogeco3 v1.0 679
AutoFact: Transitional endoplasmic reticulum ATPase-like n=3 Tax=Oryza sativa RepID=Q6YUV9_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p-loop containing ntpase domain-containing protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain