Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Transcription factor GRAS

Term: IPR005202  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1590 biogeco3 v1.0 358
AutoFact: SCARECROW-like protein 1 n=1 Tax=Pinus radiata RepID=A3E2G2_PINRA 0.0
FL-Next: tr=SCARECROW-like protein 1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: gras family transcription factor 0.0
Putative N-terminus
biog3_v1.0_unigene3367 biogeco3 v1.0 422
AutoFact: SCL domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJB4_MALDO 0.0
Blast2go: nodulation signaling pathway 1 protein 0.0
Coding
biog3_v1.0_unigene3525 biogeco3 v1.0 355
AutoFact: pfam03514, GRAS, GRAS family transcription factor 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gras family transcription factor 0.0
Putative N-terminus
biog3_v1.0_unigene3534 biogeco3 v1.0 1277
AutoFact: SCARECROW-like protein 1 n=1 Tax=Pinus radiata RepID=A3E2G2_PINRA 0.0
FL-Next: tr=SCARECROW-like protein 1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: gras family transcription factor 0.0
C-terminus
biog3_v1.0_unigene3751 biogeco3 v1.0 838
AutoFact: Scarecrow-like 1 transcription factor (Fragment) n=1 Tax=Pinus pinaster RepID=B1PPU0_PINPS 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gras family transcription factor 0.0
Putative Complete
biog3_v1.0_unigene4245 biogeco3 v1.0 439
AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S2N0_RICCO 0.0
Blast2go: scarecrow-like protein 1-like 0.0
unknown
biog3_v1.0_unigene5377 biogeco3 v1.0 1194
AutoFact: GRAS family transcription factor n=1 Tax=Populus trichocarpa RepID=B9IAQ7_POPTR 0.0
FL-Next: tr=SCARECROW-like protein 1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: gras family transcription factor 0.0
Putative C-terminus
biog3_v1.0_unigene5475 biogeco3 v1.0 422
AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S2N0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: scarecrow-like protein 1-like 0.0
C-terminus
biog3_v1.0_unigene6538 biogeco3 v1.0 563
AutoFact: SCL domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJB4_MALDO 0.0
FL-Next: tr=SCARECROW-like protein 1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: nodulation signaling pathway 1 protein 0.0
Internal
biog3_v1.0_unigene6617 biogeco3 v1.0 582
AutoFact: pfam03514, GRAS, GRAS family transcription factor 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: chitin-inducible gibberellin-responsive protein 0.0
Internal
biog3_v1.0_unigene6649 biogeco3 v1.0 645
AutoFact: Scarecrow-like 1 transcription factor (Fragment) n=1 Tax=Pinus pinaster RepID=B1PPU0_PINPS 0.0
FL-Next: tr=SCARECROW-like protein 1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: gras family transcription factor 0.0
Internal
biog3_v1.0_unigene6663 biogeco3 v1.0 1491
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: gras family transcription factor 0.0
Internal
biog3_v1.0_unigene7251 biogeco3 v1.0 642
AutoFact: DELLA protein n=3 Tax=Malus RepID=Q0HA72_MALDO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: della protein 0.0
Putative N-terminus
biog3_v1.0_unigene7724 biogeco3 v1.0 278
AutoFact: RVT_2 domain containing protein 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
Internal
biog3_v1.0_unigene8229 biogeco3 v1.0 347
AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S6I2_RICCO 0.0
Blast2go: scarecrow-like protein 4-like 0.0
Coding
biog3_v1.0_unigene8674 biogeco3 v1.0 310
AutoFact: SCARECROW-like protein 1 n=1 Tax=Pinus radiata RepID=A3E2G2_PINRA 0.0
Blast2go: gras family transcription factor 0.0
Putative coding
biog3_v1.0_unigene9389 biogeco3 v1.0 521
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: protein scarecrow-like 0.0
Internal
biog3_v1.0_unigene10493 biogeco3 v1.0 230
AutoFact: SCL domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJB4_MALDO 0.0
FL-Next: sp=Nodulation-signaling pathway 1 protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: nodulation signaling pathway 1 protein 0.0
Internal
biog3_v1.0_unigene10519 biogeco3 v1.0 337
AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S2N0_RICCO 0.0
FL-Next: tr=SCARECROW-like protein 1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: scarecrow-like protein 1-like 0.0
Internal
biog3_v1.0_unigene10644 biogeco3 v1.0 916
AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S6I2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: scarecrow-like protein 4-like 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain