Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Transcription factor TFIIB

Term: IPR000812  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene2171 biogeco3 v1.0 864
• AutoFact: AT-hook DNA-binding protein [Gossypium hirsutum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna binding 0.0
C-terminus
biog3_v1.0_unigene2434 biogeco3 v1.0 784
• AutoFact: transcription initiation factor IIB-2 [Arabidopsis thaliana] sp|Q9SS44.1|TF2B2_ARATH RecName: Full=Transcription initiation factor IIB-2; AltName: Full=General transcription factor TFIIB-2; Short=AtTFIIB2 gb|AAF02810.1|AC009400_6 transcription initiation 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription initiation factor iib 0.0
N-terminus
biog3_v1.0_unigene5139 biogeco3 v1.0 992
• AutoFact: Hexokinase n=1 Tax=Citrus sinensis RepID=Q9FVD3_CITSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hexokinase 1 0.0
Internal
biog3_v1.0_unigene5693 biogeco3 v1.0 194
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
biog3_v1.0_unigene7423 biogeco3 v1.0 1600
• AutoFact: AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_850215.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_973590.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_001118437.1| AT hook m 8.40779e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: at hook motif dna-binding family protein 0.0
C-terminus
biog3_v1.0_unigene7919 biogeco3 v1.0 2323
• AutoFact: putative AT-hook DNA-binding protein [Oryza sativa Japonica Group] gb|EAZ07603.1| hypothetical protein OsI_29854 [Oryza sativa Indica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna binding 0.0
Complete
biog3_v1.0_unigene9500 biogeco3 v1.0 197
• AutoFact: transcription initiation factor IIB-2 [Arabidopsis thaliana] sp|Q9SS44.1|TF2B2_ARATH RecName: Full=Transcription initiation factor IIB-2; AltName: Full=General transcription factor TFIIB-2; Short=AtTFIIB2 gb|AAF02810.1|AC009400_6 transcription initiation 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription initiation factor iib 0.0
Putative C-terminus
biog3_v1.0_unigene11153 biogeco3 v1.0 1362
• AutoFact: AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_850215.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_973590.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_001118437.1| AT hook m 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: at hook motif dna-binding family protein 0.0
N-terminus
biog3_v1.0_unigene11549 biogeco3 v1.0 1466
• AutoFact: putative AT-hook DNA-binding protein [Oryza sativa Japonica Group] gb|EAZ07603.1| hypothetical protein OsI_29854 [Oryza sativa Indica Group] 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna binding 0.0
Complete
biog3_v1.0_unigene11724 biogeco3 v1.0 1645
• AutoFact: Transcription initiation factor IIB n=7 Tax=Poaceae RepID=TF2B_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription initiation factor iib 0.0
Complete
biog3_v1.0_unigene13105 biogeco3 v1.0 662
• AutoFact: transcription initiation factor IIB-2 [Arabidopsis thaliana] sp|Q9SS44.1|TF2B2_ARATH RecName: Full=Transcription initiation factor IIB-2; AltName: Full=General transcription factor TFIIB-2; Short=AtTFIIB2 gb|AAF02810.1|AC009400_6 transcription initiation 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription initiation factor iib 0.0
Internal
biog3_v1.0_unigene14595 biogeco3 v1.0 375
• AutoFact: Hexokinase n=1 Tax=Citrus sinensis RepID=Q9FVD3_CITSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hexokinase 1 0.0
Internal
biog3_v1.0_unigene14716 biogeco3 v1.0 272
• AutoFact: Hexokinase n=1 Tax=Citrus sinensis RepID=Q9FVD3_CITSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hexokinase 1 0.0
C-terminus
biog3_v1.0_unigene15563 biogeco3 v1.0 153
• AutoFact: Transcription initiation factor IIB n=7 Tax=Poaceae RepID=TF2B_ORYSJ 0.0
• Blast2go: transcription initiation factor iib 0.0
unknown
biog3_v1.0_unigene17486 biogeco3 v1.0 232
• AutoFact: AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_850215.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_973590.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_001118437.1| AT hook m 8.40779e-45
• Blast2go: at hook motif dna-binding family protein 0.0
unknown
biog3_v1.0_unigene18420 biogeco3 v1.0 240
• AutoFact: putative AT-hook DNA-binding protein [Oryza sativa Japonica Group] gb|EAZ07603.1| hypothetical protein OsI_29854 [Oryza sativa Indica Group] 5.60519e-45
• Blast2go: dna binding 0.0
unknown
biog3_v1.0_unigene18507 biogeco3 v1.0 104
• AutoFact: putative AT-hook DNA-binding protein [Oryza sativa Japonica Group] gb|EAZ07603.1| hypothetical protein OsI_29854 [Oryza sativa Indica Group] 5.60519e-45
• Blast2go: dna binding 0.0
unknown
biog3_v1.0_unigene19560 biogeco3 v1.0 182
• AutoFact: Hexokinase n=1 Tax=Citrus sinensis RepID=Q9FVD3_CITSI 0.0
• Blast2go: hexokinase 1 0.0
unknown
biog3_v1.0_unigene20634 biogeco3 v1.0 386
• AutoFact: WS0287.B21_H05 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS0287_H05 5, mRNA sequence. 1.0e-32
• Blast2go: transcription factor iiib 90 kda subunit-like 2.30303e-23
unknown
biog3_v1.0_unigene20804 biogeco3 v1.0 206
• AutoFact: Transcription initiation factor IIB-2 n=10 Tax=rosids RepID=TF2B2_ARATH 5.0e-35
• Blast2go: transcription initiation factor iib 9.48708e-35
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain