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Assembly Name: biogeco3 v1.0

Name: Nuclear transport factor 2, Eukaryote

Term: IPR018222  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene224 biogeco3 v1.0 392
AutoFact: Ninja-family protein AFP3 n=1 Tax=Arabidopsis thaliana RepID=AFP3_ARATH 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ninja-family protein afp3 3.08565e-15
Putative Complete
biog3_v1.0_unigene556 biogeco3 v1.0 1460
AutoFact: MAP kinase n=1 Tax=Selaginella moellendorffii RepID=D8SYB3_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitogen-activated protein kinase kinase 6 0.0
Complete
biog3_v1.0_unigene1107 biogeco3 v1.0 393
AutoFact: nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] dbj|BAB09056.1| unnamed protein product [Arabidopsis thaliana] gb|AAL86001.1| unknown protein [Arabidopsis thaliana] gb|AAM45065.1| unknown protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-gtpase-activating protein-binding 0.0
Internal
biog3_v1.0_unigene1684 biogeco3 v1.0 618
AutoFact: putative Ras-GTPase-activating protein binding protein 1 [Oryza sativa Japonica Group] dbj|BAG91794.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
N-terminus
biog3_v1.0_unigene2059 biogeco3 v1.0 522
AutoFact: Ribonucleoprotein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SQT1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene2276 biogeco3 v1.0 442
AutoFact: putative Ras-GTPase-activating protein binding protein 1 [Oryza sativa Japonica Group] dbj|BAG91794.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
C-terminus
biog3_v1.0_unigene4142 biogeco3 v1.0 262
AutoFact: Metal transporter Nramp1 n=9 Tax=Brassicaceae RepID=NRAM1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: metal ion transporter 0.0
Internal
biog3_v1.0_unigene6442 biogeco3 v1.0 485
AutoFact: mitogen-activated protein kinase kinase [Suaeda salsa] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: mitogen-activated protein kinase kinase 6-like 0.0
C-terminus
biog3_v1.0_unigene6511 biogeco3 v1.0 870
AutoFact: Tumor suppressor candidate, putative n=1 Tax=Ricinus communis RepID=B9RXQ7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tumor suppressor 0.0
C-terminus
biog3_v1.0_unigene6946 biogeco3 v1.0 352
AutoFact: Ribonucleoprotein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RNK5_RICCO 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 28 kda chloroplastic-like 0.0
Internal
biog3_v1.0_unigene7479 biogeco3 v1.0 333
AutoFact: Serinc-domain containing serine and sphingolipid biosynthesis protein [Arabidopsis thaliana] gb|AAL24131.1| unknown protein [Arabidopsis thaliana] gb|AAM51345.1| unknown protein [Arabidopsis thaliana] gb|AEE83266.1| Serinc-domain containing serine and sph 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serinc-domain containing serine and sphingolipid biosynthesis protein 0.0
Internal
biog3_v1.0_unigene9356 biogeco3 v1.0 695
AutoFact: nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] dbj|BAB10647.1| unnamed protein product [Arabidopsis thaliana] gb|AAL32982.1| AT5g60980/MSL3_100 [Arabidopsis thaliana] gb|AAO23575.1| At5g60980/MSL3_100 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
C-terminus
biog3_v1.0_unigene10352 biogeco3 v1.0 665
AutoFact: nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] dbj|BAB10647.1| unnamed protein product [Arabidopsis thaliana] gb|AAL32982.1| AT5g60980/MSL3_100 [Arabidopsis thaliana] gb|AAO23575.1| At5g60980/MSL3_100 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
Putative N-terminus
biog3_v1.0_unigene10445 biogeco3 v1.0 899
AutoFact: nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] dbj|BAB09056.1| unnamed protein product [Arabidopsis thaliana] gb|AAL86001.1| unknown protein [Arabidopsis thaliana] gb|AAM45065.1| unknown protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-gtpase-activating protein-binding 0.0
C-terminus
biog3_v1.0_unigene10956 biogeco3 v1.0 712
AutoFact: mitogen-activated protein kinase kinase [Suaeda salsa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitogen-activated protein kinase kinase 6-like 0.0
Putative C-terminus
biog3_v1.0_unigene13136 biogeco3 v1.0 596
AutoFact: Nuclear transport factor 2 n=5 Tax=Brassicaceae RepID=NTF2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transport factor 2 0.0
Complete
biog3_v1.0_unigene13169 biogeco3 v1.0 425
AutoFact: Nuclear transport factor 2 n=5 Tax=Brassicaceae RepID=NTF2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transport factor 2 0.0
C-terminus
biog3_v1.0_unigene16111 biogeco3 v1.0 264
AutoFact: putative Ras-GTPase-activating protein binding protein 1 [Oryza sativa Japonica Group] dbj|BAG91794.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
N-terminus
biog3_v1.0_unigene18296 biogeco3 v1.0 140
AutoFact: Metal transporter Nramp3 n=3 Tax=Poaceae RepID=NRAM3_ORYSJ 0.0
FL-Next: sp=Metal transporter Nramp6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: metal transporter nramp6 0.0
Internal
biog3_v1.0_unigene18393 biogeco3 v1.0 200
AutoFact: Nuclear transport factor 2 n=5 Tax=Brassicaceae RepID=NTF2_ARATH 0.0
Blast2go: nuclear transport factor 2 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain