Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Histone-fold

Term: IPR009072  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene298 biogeco3 v1.0 710
AutoFact: nuclear transcription factor Y subunit B-3 [Arabidopsis thaliana] sp|O23310.1|NFYB3_ARATH RecName: Full=Nuclear transcription factor Y subunit B-3; Short=AtNF-YB-3; AltName: Full=Transcriptional activator HAP3C emb|CAB10233.1| CCAAT-binding transcription 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccaat-box binding factor hap3 0.0
Complete
biog3_v1.0_unigene612 biogeco3 v1.0 337
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh62-like 0.0
Internal
biog3_v1.0_unigene711 biogeco3 v1.0 660
AutoFact: Histone H2B.2 n=33 Tax=Spermatophyta RepID=H2B2_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
C-terminus
biog3_v1.0_unigene845 biogeco3 v1.0 1082
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ricinus communis RepID=B9SWA7_RICCO 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 5-like 0.0
Internal
biog3_v1.0_unigene874 biogeco3 v1.0 1312
AutoFact: Ccaat-binding transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHZ1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccaat-binding transcription 0.0
Complete
biog3_v1.0_unigene1089 biogeco3 v1.0 866
AutoFact: Nuclear transcription factor Y subunit C-2 n=2 Tax=Arabidopsis RepID=NFYC2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit c-2 0.0
Putative Complete
biog3_v1.0_unigene1135 biogeco3 v1.0 365
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh62-like 0.0
Putative C-terminus
biog3_v1.0_unigene1137 biogeco3 v1.0 751
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2 0.0
Complete
biog3_v1.0_unigene1615 biogeco3 v1.0 181
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 2.0e-36
Blast2go: histone h2a 1.71538e-38
unknown
biog3_v1.0_unigene2281 biogeco3 v1.0 287
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bhlh transcription factor 0.0
Putative C-terminus
biog3_v1.0_unigene2415 biogeco3 v1.0 281
AutoFact: Histone H3 n=2 Tax=Pediculus humanus corporis RepID=E0V960_PEDHC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h3 0.0
N-terminus
biog3_v1.0_unigene2495 biogeco3 v1.0 139
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 1.99993e-41
Blast2go: histone h2 0.0
unknown
biog3_v1.0_unigene2964 biogeco3 v1.0 308
AutoFact: histone H4 [Hyacinthus orientalis] 9.0e-33
Blast2go: histone h4 4.95499e-42
unknown
biog3_v1.0_unigene3041 biogeco3 v1.0 682
AutoFact: nuclear transcription factor Y subunit B-8 [Arabidopsis thaliana] ref|NP_973617.1| nuclear transcription factor Y subunit B-8 [Arabidopsis thaliana] ref|NP_001031500.1| nuclear transcription factor Y subunit B-8 [Arabidopsis thaliana] sp|Q8VYK4.1|NFYB8_AR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccaat-box binding factor hap3 0.0
C-terminus
biog3_v1.0_unigene3522 biogeco3 v1.0 815
AutoFact: PREDICTED: similar to Late histone H2A.2.2 n=2 Tax=Hydra magnipapillata RepID=UPI0001924B8D 3.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 0.0
Complete
biog3_v1.0_unigene3986 biogeco3 v1.0 795
AutoFact: nuclear factor Y, subunit C11 [Arabidopsis thaliana] gb|AAL58929.1|AF462841_1 At3g12480/MQC3.32 [Arabidopsis thaliana] dbj|BAB03155.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28786.1| At3g12480/MQC3.32 [Arabidopsis thaliana] gb|AEE75200.1| nu 4.00001e-41
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene4275 biogeco3 v1.0 310
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dek domain-containing chromatin associated protein 0.0
Internal
biog3_v1.0_unigene4361 biogeco3 v1.0 635
AutoFact: TBP-associated factor 13 n=1 Tax=Solanum melongena RepID=F4YY46_SOLME 0.0
FL-Next: tr=TBP-associated factor 13; Solanum melongena (Eggplant) (Aubergine). 0.0
Blast2go: transcription factor tfiid 0.0
Putative Complete
biog3_v1.0_unigene4677 biogeco3 v1.0 492
AutoFact: TATA binding protein associated factor n=1 Tax=Solanum tuberosum RepID=Q3LHL0_SOLTU 7.0e-37
FL-Next: tr=F28G4.8 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription initiation factor tfiid subunit a 4.14924e-42
Internal
biog3_v1.0_unigene4860 biogeco3 v1.0 371
AutoFact: nuclear factor Y, subunit C11 [Arabidopsis thaliana] gb|AAL58929.1|AF462841_1 At3g12480/MQC3.32 [Arabidopsis thaliana] dbj|BAB03155.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28786.1| At3g12480/MQC3.32 [Arabidopsis thaliana] gb|AEE75200.1| nu 4.00001e-41
Blast2go: protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain