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Assembly Name: biogeco3 v1.0

Name: Mitochodrial transcription termination factor-related

Term: IPR003690  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene785 biogeco3 v1.0 400
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized protein 6.92495e-30
N-terminus
biog3_v1.0_unigene2790 biogeco3 v1.0 330
AutoFact: protoporphyrinogen oxidase [Arabidopsis thaliana] gb|AAL77672.1| AT5g14220/MUA22_22 [Arabidopsis thaliana] gb|AAM26644.1| AT5g14220/MUA22_22 [Arabidopsis thaliana] gb|AED92001.1| protoporphyrinogen oxidase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protoporphyrinogen oxidase 0.0
Internal
biog3_v1.0_unigene3072 biogeco3 v1.0 260
AutoFact: protoporphyrinogen IX oxidase [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial protoporphyrinogen oxidase 0.0
Internal
biog3_v1.0_unigene3553 biogeco3 v1.0 214
AutoFact: transcription termination factor domain-containing protein [Arabidopsis thaliana] gb|AAC23410.1| expressed protein [Arabidopsis thaliana] gb|AAK64024.1| unknown protein [Arabidopsis thaliana] gb|AAL85111.1| unknown protein [Arabidopsis thaliana] gb|AEC103 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mterf family protein 0.0
Internal
biog3_v1.0_unigene4045 biogeco3 v1.0 1159
AutoFact: WS00727.B21_N20 WS-PS-N-A-8 Picea glauca cDNA clone WS00727_N20 3, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein 0.0
Internal
biog3_v1.0_unigene5064 biogeco3 v1.0 617
AutoFact: DUF810 domain containing protein 2.0e-22
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized protein 0.0
Internal
biog3_v1.0_unigene5130 biogeco3 v1.0 398
AutoFact: DUF810 domain containing protein 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized protein loc100248009 0.0
Internal
biog3_v1.0_unigene5230 biogeco3 v1.0 563
AutoFact: Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TK03_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 5b 0.0
C-terminus
biog3_v1.0_unigene5758 biogeco3 v1.0 1083
AutoFact: mTERF domain containing protein 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor 0.0
Putative Complete
biog3_v1.0_unigene7282 biogeco3 v1.0 1304
AutoFact: Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TK03_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 5b 0.0
N-terminus
biog3_v1.0_unigene7401 biogeco3 v1.0 426
AutoFact: mTERF domain containing protein 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.08286e-44
C-terminus
biog3_v1.0_unigene7634 biogeco3 v1.0 862
AutoFact: Mitochondrial transcription termination factor family protein n=2 Tax=Arabidopsis RepID=O64531_ARATH 9.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor family protein 0.0
C-terminus
biog3_v1.0_unigene7812 biogeco3 v1.0 240
AutoFact: Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] gb|AAC79107.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77784.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82257.1| Mitochondrial transcription terminat 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor family protein 0.0
Internal
biog3_v1.0_unigene8572 biogeco3 v1.0 465
AutoFact: Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TK03_PHYPA 0.0
Blast2go: eukaryotic translation initiation factor 5b 0.0
Coding
biog3_v1.0_unigene8704 biogeco3 v1.0 519
AutoFact: transcription termination factor domain-containing protein [Arabidopsis thaliana] gb|AAC23410.1| expressed protein [Arabidopsis thaliana] gb|AAK64024.1| unknown protein [Arabidopsis thaliana] gb|AAL85111.1| unknown protein [Arabidopsis thaliana] gb|AEC103 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mterf family protein 0.0
N-terminus
biog3_v1.0_unigene8744 biogeco3 v1.0 719
AutoFact: Mitochondrial transcription termination factor-like n=2 Tax=Oryza sativa RepID=Q6Z8L0_ORYSJ 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor-like 0.0
Putative N-terminus
biog3_v1.0_unigene9096 biogeco3 v1.0 271
AutoFact: DUF810 domain containing protein 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized protein loc100248009 0.0
Internal
biog3_v1.0_unigene10737 biogeco3 v1.0 767
AutoFact: Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] gb|AAC79107.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77784.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82257.1| Mitochondrial transcription terminat 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor family protein 0.0
Internal
biog3_v1.0_unigene10913 biogeco3 v1.0 1709
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene11188 biogeco3 v1.0 1099
AutoFact: mitochondrial transcription termination factor-like [Oryza sativa Japonica Group] 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain