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Assembly Name: biogeco3 v1.0

Name: Paired amphipathic helix

Term: IPR003822  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene929 biogeco3 v1.0 495
AutoFact: Os01g0109700 protein (Fragment) n=6 Tax=Oryza sativa RepID=Q0JRB9_ORYSJ 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sin3 histone deacetylase complex 0.0
Internal
biog3_v1.0_unigene1215 biogeco3 v1.0 908
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: atp binding 0.0
C-terminus
biog3_v1.0_unigene1649 biogeco3 v1.0 883
AutoFact: WRKY transcription factor PmWRKY108 (Fragment) n=2 Tax=Pinus monticola RepID=E6Y3E0_PINMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky transcription factor 0.0
Internal
biog3_v1.0_unigene2662 biogeco3 v1.0 393
AutoFact: SIN3 component, histone deacetylase complex n=1 Tax=Populus trichocarpa RepID=B9HLV3_POPTR 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
Internal
biog3_v1.0_unigene4441 biogeco3 v1.0 530
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
unknown
biog3_v1.0_unigene5085 biogeco3 v1.0 504
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCK4_RICCO 0.0
FL-Next: sp=Probable WRKY transcription factor 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene7272 biogeco3 v1.0 579
AutoFact: Hydroxyacylglutathione hydrolase 2 [Arabidopsis thaliana] gb|AEC08531.1| Hydroxyacylglutathione hydrolase 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glyoxalase ii 0.0
C-terminus
biog3_v1.0_unigene7572 biogeco3 v1.0 272
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
Internal
biog3_v1.0_unigene8427 biogeco3 v1.0 346
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCK4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein Sb06g030295; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene14493 biogeco3 v1.0 356
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
Putative coding
biog3_v1.0_unigene16203 biogeco3 v1.0 235
AutoFact: Putative NPK1-related protein kinase [Oryza sativa Japonica Group] gb|AAM47616.1|AC122147_5 Putative NPK1-related protein kinase [Oryza sativa Japonica Group] gb|AAP51983.1| Protein kinase domain containing protein [Oryza sativa Japonica Group] 9.99995e-41
Blast2go: protein 0.0
Putative coding
biog3_v1.0_unigene16506 biogeco3 v1.0 269
AutoFact: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative n=1 Tax=Ricinus communis RepID=B9RTY0_RICCO 0.0
Blast2go: mitogen activated protein kinase kinase kinase 0.0
Coding
biog3_v1.0_unigene16582 biogeco3 v1.0 263
AutoFact: putative mitogen-activated protein kinase 1 [Medicago sativa] 0.0
Blast2go: mitogen-activated protein kinase kinase kinase 0.0
unknown
biog3_v1.0_unigene17478 biogeco3 v1.0 300
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCK4_RICCO 0.0
FL-Next: sp=Probable WRKY transcription factor 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene18801 biogeco3 v1.0 289
AutoFact: WRKY domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJF7_MALDO 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3 0.0
Internal
biog3_v1.0_unigene19211 biogeco3 v1.0 122
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
Internal
biog3_v1.0_unigene20297 biogeco3 v1.0 301
AutoFact: putative mitogen-activated protein kinase 1 [Medicago sativa] 0.0
FL-Next: sp=Mitogen-activated protein kinase kinase kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: mitogen-activated protein kinase kinase kinase 1-like 0.0
Internal
biog3_v1.0_unigene20600 biogeco3 v1.0 294
AutoFact: putative mitogen-activated protein kinase 1 [Medicago sativa] 5.0e-25
Blast2go: mitogen-activated protein kinase kinase kinase 1-like 6.14505e-35
Coding
biog3_v1.0_unigene21922 biogeco3 v1.0 269
AutoFact: Os01g0109700 protein (Fragment) n=6 Tax=Oryza sativa RepID=Q0JRB9_ORYSJ 0.0
Blast2go: sin3 histone deacetylase complex 0.0
unknown
biog3_v1.0_unigene22155 biogeco3 v1.0 339
AutoFact: putative mitogen-activated protein kinase 1 [Medicago sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitogen-activated protein kinase kinase kinase 1-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain