Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Zinc finger, Dof-type

Term: IPR003851  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene118 biogeco3 v1.0 383
AutoFact: Dof zinc finger protein 12 n=1 Tax=Hordeum vulgare subsp. vulgare RepID=A5HWG1_HORVD 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dof zinc finger protein 2.41959e-40
N-terminus
biog3_v1.0_unigene1018 biogeco3 v1.0 354
AutoFact: Dof zinc finger protein 12 n=1 Tax=Hordeum vulgare subsp. vulgare RepID=A5HWG1_HORVD 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dof-like protein 34 0.0
Internal
biog3_v1.0_unigene3210 biogeco3 v1.0 671
AutoFact: Dof domain zinc finger DNA-binding protein n=1 Tax=Picea abies RepID=Q14DX9_PICAB 5.0e-31
FL-Next: tr=Dof domain zinc finger DNA-binding protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: f-box family protein 6.92407e-34
N-terminus
biog3_v1.0_unigene3934 biogeco3 v1.0 356
AutoFact: SWI/SNF complex subunit SWI3B [Arabidopsis thaliana] sp|Q84JG2.1|SWI3B_ARATH RecName: Full=SWI/SNF complex subunit SWI3B; Short=AtSWI3B; AltName: Full=Transcription regulatory protein SWI3B gb|AAO42112.1| putative SWI/SNF complex subunit SW13 [Arabidopsis 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf complex subunit swi3b 0.0
Internal
biog3_v1.0_unigene4461 biogeco3 v1.0 439
AutoFact: Dof domain zinc finger DNA-binding protein n=1 Tax=Picea abies RepID=Q14DX9_PICAB 1.0e-17
Blast2go: cycling dof factor-like 1 7.57139e-19
unknown
biog3_v1.0_unigene5426 biogeco3 v1.0 520
AutoFact: DOF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIX8_MALDO 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 2.8026e-45
Complete
biog3_v1.0_unigene7696 biogeco3 v1.0 837
AutoFact: DOF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIX8_MALDO 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 2.8026e-45
N-terminus
biog3_v1.0_unigene8056 biogeco3 v1.0 1291
AutoFact: Zn finger protein [Nicotiana tabacum] 2.0e-33
Blast2go: f-box family protein 3.1703e-41
Coding
biog3_v1.0_unigene8184 biogeco3 v1.0 394
AutoFact: Dof zinc finger protein 12 n=1 Tax=Hordeum vulgare subsp. vulgare RepID=A5HWG1_HORVD 9.0e-28
Blast2go: dof-like protein 34 0.0
unknown
biog3_v1.0_unigene8826 biogeco3 v1.0 315
AutoFact: pfam02701, zf-Dof, Dof domain, zinc finger 2.0e-38
FL-Next: tr=Dof-type zinc finger protein 15; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: dof zinc finger 0.0
Internal
biog3_v1.0_unigene10085 biogeco3 v1.0 713
AutoFact: Dof transcription factor n=1 Tax=Pinus pinaster RepID=B0BCH1_PINPS 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
C-terminus
biog3_v1.0_unigene13239 biogeco3 v1.0 390
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0T3_RICCO 2.0e-32
FL-Next: tr=Dof transcription factor; Pinus pinaster (Maritime pine). 0.0
Blast2go: dof zinc finger protein 8.13057e-36
Internal
biog3_v1.0_unigene13759 biogeco3 v1.0 419
AutoFact: SWI/SNF complex subunit SWI3B [Arabidopsis thaliana] sp|Q84JG2.1|SWI3B_ARATH RecName: Full=SWI/SNF complex subunit SWI3B; Short=AtSWI3B; AltName: Full=Transcription regulatory protein SWI3B gb|AAO42112.1| putative SWI/SNF complex subunit SW13 [Arabidopsis 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf complex subunit swi3b 0.0
Internal
biog3_v1.0_unigene16389 biogeco3 v1.0 174
AutoFact: DOF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIX8_MALDO 9.99995e-41
Blast2go: f-box family protein 2.8026e-45
unknown
biog3_v1.0_unigene18542 biogeco3 v1.0 258
AutoFact: SWI/SNF complex subunit SWI3B [Arabidopsis thaliana] sp|Q84JG2.1|SWI3B_ARATH RecName: Full=SWI/SNF complex subunit SWI3B; Short=AtSWI3B; AltName: Full=Transcription regulatory protein SWI3B gb|AAO42112.1| putative SWI/SNF complex subunit SW13 [Arabidopsis 1.0e-39
FL-Next: sp=SWI/SNF complex subunit SWI3B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf complex subunit swi3b 0.0
Internal
biog3_v1.0_unigene21311 biogeco3 v1.0 238
AutoFact: Dof transcription factor n=1 Tax=Pinus pinaster RepID=B0BCH1_PINPS 0.0
FL-Next: tr=Dof transcription factor; Pinus pinaster (Maritime pine). 0.0
Blast2go: dof zinc finger 0.0
C-terminus
biog3_v1.0_unigene23917 biogeco3 v1.0 254
AutoFact: Zn finger protein [Nicotiana tabacum] 2.0e-33
Blast2go: f-box family protein 3.1703e-41
unknown
biog3_v1.0_unigene24431 biogeco3 v1.0 288
AutoFact: Dof transcription factor n=1 Tax=Pinus pinaster RepID=B0BCH1_PINPS 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain