Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: JmjC domain

Term: IPR003347  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene4773 biogeco3 v1.0 620
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: dna-binding protein chloroplast 0.0
Internal
biog3_v1.0_unigene6498 biogeco3 v1.0 662
AutoFact: structural maintenance of chromosomes 5 [Arabidopsis thaliana] emb|CAC01791.1| putative protein [Arabidopsis thaliana] gb|AED92224.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein F1N13_60; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: structural maintenance of chromosomes 5 0.0
Internal
biog3_v1.0_unigene14668 biogeco3 v1.0 399
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100258626 0.0
Putative Complete
biog3_v1.0_unigene16242 biogeco3 v1.0 329
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 0.0
Blast2go: transcription factor jumonji domain-containing protein 0.0
Coding
biog3_v1.0_unigene17066 biogeco3 v1.0 242
AutoFact: Unassigned protein
FL-Next: sp=F-box protein At1g78280; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at1g78280-like 9.48532e-15
Internal
biog3_v1.0_unigene19194 biogeco3 v1.0 256
AutoFact: structural maintenance of chromosomes 5 [Arabidopsis thaliana] emb|CAC01791.1| putative protein [Arabidopsis thaliana] gb|AED92224.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana] 0.0
Blast2go: structural maintenance of chromosomes 5 0.0
unknown
biog3_v1.0_unigene20095 biogeco3 v1.0 425
AutoFact: JmjC domain containing protein 7.0e-36
FL-Next: sp=Lysine-specific demethylase REF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: jumonji domain protein 0.0
Internal
biog3_v1.0_unigene20262 biogeco3 v1.0 289
AutoFact: structural maintenance of chromosomes 5 [Arabidopsis thaliana] emb|CAC01791.1| putative protein [Arabidopsis thaliana] gb|AED92224.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: structural maintenance of chromosomes 5 0.0
Internal
biog3_v1.0_unigene21662 biogeco3 v1.0 269
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9S7K7_RICCO 0.0
Blast2go: probable lysine-specific demethylase jmj14-like 0.0
Putative coding
biog3_v1.0_unigene21845 biogeco3 v1.0 338
AutoFact: Jumonji domain protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9GWH9_POPTR 0.0
FL-Next: Isoform 2 of Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 0.0
Blast2go: lysine-specific demethylase 5d 0.0
Internal
biog3_v1.0_unigene22274 biogeco3 v1.0 215
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 0.0
Blast2go: transcription factor jumonji domain-containing protein 0.0
Coding
biog3_v1.0_unigene22380 biogeco3 v1.0 311
AutoFact: Os10g0577600 protein n=4 Tax=Oryza sativa RepID=Q336N8_ORYSJ 4.0e-38
FL-Next: sp=Lysine-specific demethylase REF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: jumonji domain protein 1.4013e-44
Internal
biog3_v1.0_unigene22832 biogeco3 v1.0 288
AutoFact: Unassigned protein
FL-Next: sp=F-box protein At5g06550; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.17753e-24
C-terminus
biog3_v1.0_unigene22849 biogeco3 v1.0 368
AutoFact: putative pentatricopeptide repeat protein [Gossypium hirsutum] 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 2.66247e-44
Internal
biog3_v1.0_unigene24838 biogeco3 v1.0 672
AutoFact: structural maintenance of chromosomes 5 [Arabidopsis thaliana] emb|CAC01791.1| putative protein [Arabidopsis thaliana] gb|AED92224.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: structural maintenance of chromosomes 5 0.0
Putative C-terminus
biog3_v1.0_unigene25366 biogeco3 v1.0 269
AutoFact: pfam02475, Met_10, Met-10+ like-protein 8.0e-35
FL-Next: sp=tRNA wybutosine-synthesizing protein 2/3/4; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: trna wybutosine-synthesizing protein 2 3 4-like 0.0
Internal
biog3_v1.0_unigene25376 biogeco3 v1.0 321
AutoFact: WS02925.CR_M21 SS-IB-A-FL-15 Picea sitchensis cDNA clone WS02925_M21 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna-binding protein chloroplast 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain