Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Reticulon

Term: IPR003388  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene403 biogeco3 v1.0 1447
AutoFact: Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana] gb|AAF79453.1|AC025808_35 F18O14.8 [Arabidopsis thaliana] gb|AAM65662.1| unknown [Arabidopsis thaliana] gb|ABG25079.1| At1g19360 [Arabidopsis thaliana] dbj|BAF00917.1| hypothetic 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleotide-diphospho-sugar transferase family protein 0.0
Putative Complete
biog3_v1.0_unigene697 biogeco3 v1.0 369
AutoFact: RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gb|AEE83159.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene2066 biogeco3 v1.0 278
AutoFact: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Arabidopsis thaliana] sp|Q67ZE1.2|HSDD2_ARATH RecName: Full=3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2; Short=At3BETAHSD/D2; AltName: Full=4alpha-carboxysterol-C3-dehydrogenase/C4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3beta-hydroxysteroid-dehydrogenase decarboxylase isoform 2 0.0
Internal
biog3_v1.0_unigene2605 biogeco3 v1.0 292
AutoFact: Reticulon-like protein B23 n=1 Tax=Arabidopsis thaliana RepID=RTNLU_ARATH 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reticulon-like protein b22 8.47156e-34
Internal
biog3_v1.0_unigene4249 biogeco3 v1.0 431
AutoFact: reticulon-like protein B16 [Arabidopsis thaliana] sp|Q8GYH6.1|RTNLP_ARATH RecName: Full=Reticulon-like protein B16; Short=AtRTNLB16 dbj|BAC42275.1| unknown protein [Arabidopsis thaliana] gb|AAO50641.1| unknown protein [Arabidopsis thaliana] gb|AEE74972.1| 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reticulon-like protein b12 0.0
Internal
biog3_v1.0_unigene4957 biogeco3 v1.0 491
AutoFact: Reticulon domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene5449 biogeco3 v1.0 1087
AutoFact: reticulon-like protein B8 [Arabidopsis thaliana] ref|NP_850551.1| reticulon-like protein B8 [Arabidopsis thaliana] sp|Q9SS37.1|RTNLH_ARATH RecName: Full=Reticulon-like protein B8; Short=AtRTNLB8 gb|AAF02816.1|AC009400_12 unknown protein [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reticulon-like protein b8 0.0
Putative Complete
biog3_v1.0_unigene5527 biogeco3 v1.0 1220
AutoFact: 24 kDa seed maturation protein n=1 Tax=Elaeis guineensis RepID=B3TLN1_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 24 kda seed maturation protein 0.0
Complete
biog3_v1.0_unigene5567 biogeco3 v1.0 545
AutoFact: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Arabidopsis thaliana] sp|Q67ZE1.2|HSDD2_ARATH RecName: Full=3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2; Short=At3BETAHSD/D2; AltName: Full=4alpha-carboxysterol-C3-dehydrogenase/C4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3beta-hydroxysteroid-dehydrogenase decarboxylase isoform 2 0.0
C-terminus
biog3_v1.0_unigene7272 biogeco3 v1.0 579
AutoFact: Hydroxyacylglutathione hydrolase 2 [Arabidopsis thaliana] gb|AEC08531.1| Hydroxyacylglutathione hydrolase 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glyoxalase ii 0.0
C-terminus
biog3_v1.0_unigene10751 biogeco3 v1.0 1659
AutoFact: reticulon-like protein B21 [Arabidopsis thaliana] sp|Q56X72.2|RTNLS_ARATH RecName: Full=Reticulon-like protein B21; Short=AtRTNLB21 gb|AED96983.1| reticulon-like protein B21 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene12087 biogeco3 v1.0 1681
AutoFact: Reticulon domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 24 kda seed maturation protein 0.0
Complete
biog3_v1.0_unigene14432 biogeco3 v1.0 339
AutoFact: putative hydroxyacylglutathione hydrolase 2, chloroplast [Arabidopsis thaliana] sp|Q8LDW8.1|GLO2D_ARATH RecName: Full=Probable hydroxyacylglutathione hydrolase 2, chloroplast; AltName: Full=Glyoxalase 2-4; AltName: Full=Glyoxalase II; Short=Glx II; Flags: 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glyoxalase ii 0.0
Putative N-terminus
biog3_v1.0_unigene15694 biogeco3 v1.0 186
AutoFact: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Arabidopsis thaliana] sp|Q67ZE1.2|HSDD2_ARATH RecName: Full=3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2; Short=At3BETAHSD/D2; AltName: Full=4alpha-carboxysterol-C3-dehydrogenase/C4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3beta-hydroxysteroid-dehydrogenase decarboxylase isoform 2 0.0
Internal
biog3_v1.0_unigene17414 biogeco3 v1.0 105
AutoFact: Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana] gb|AAF79453.1|AC025808_35 F18O14.8 [Arabidopsis thaliana] gb|AAM65662.1| unknown [Arabidopsis thaliana] gb|ABG25079.1| At1g19360 [Arabidopsis thaliana] dbj|BAF00917.1| hypothetic 0.0
Blast2go: nucleotide-diphospho-sugar transferase family protein 0.0
unknown
biog3_v1.0_unigene17672 biogeco3 v1.0 209
AutoFact: reticulon-like protein B21 [Arabidopsis thaliana] sp|Q56X72.2|RTNLS_ARATH RecName: Full=Reticulon-like protein B21; Short=AtRTNLB21 gb|AED96983.1| reticulon-like protein B21 [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene23169 biogeco3 v1.0 334
AutoFact: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Arabidopsis thaliana] sp|Q67ZE1.2|HSDD2_ARATH RecName: Full=3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2; Short=At3BETAHSD/D2; AltName: Full=4alpha-carboxysterol-C3-dehydrogenase/C4 0.0
Blast2go: 3beta-hydroxysteroid-dehydrogenase decarboxylase isoform 2 0.0
unknown
biog3_v1.0_unigene23378 biogeco3 v1.0 470
AutoFact: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Arabidopsis thaliana] sp|Q67ZE1.2|HSDD2_ARATH RecName: Full=3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2; Short=At3BETAHSD/D2; AltName: Full=4alpha-carboxysterol-C3-dehydrogenase/C4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3beta-hydroxysteroid-dehydrogenase decarboxylase isoform 2 0.0
Internal
biog3_v1.0_unigene23509 biogeco3 v1.0 204
AutoFact: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Arabidopsis thaliana] sp|Q67ZE1.2|HSDD2_ARATH RecName: Full=3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2; Short=At3BETAHSD/D2; AltName: Full=4alpha-carboxysterol-C3-dehydrogenase/C4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3beta-hydroxysteroid-dehydrogenase decarboxylase isoform 2 0.0
Internal
biog3_v1.0_unigene24390 biogeco3 v1.0 265
AutoFact: Reticulon domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain