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Assembly Name: biogeco3 v1.0

Name: Tetratricopeptide TPR2

Term: IPR013105  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene10933 biogeco3 v1.0 909
AutoFact: pfam01425, Amidase, Amidase 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: amidase family protein 0.0
C-terminus
biog3_v1.0_unigene11316 biogeco3 v1.0 736
AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9RB32_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin light 0.0
Internal
biog3_v1.0_unigene11921 biogeco3 v1.0 1994
AutoFact: putative TPR-containing nuclear phosphoprotein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase-associated protein ctr9 homolog 0.0
Complete
biog3_v1.0_unigene12009 biogeco3 v1.0 627
AutoFact: RelA-SpoT like protein RSH4 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp pyrophosphokinase 0.0
Internal
biog3_v1.0_unigene13152 biogeco3 v1.0 559
AutoFact: peroxisomal targeting signal 1 receptor [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxisomal targeting signal 1 receptor 0.0
Putative C-terminus
biog3_v1.0_unigene13156 biogeco3 v1.0 654
AutoFact: NMDA receptor-regulated protein, putative n=1 Tax=Ricinus communis RepID=B9RUV2_RICCO 0.0
FL-Next: tr=Acetyltransferase 1-like; Oryza sativa subsp. japonica (Rice). 0.0
Internal
biog3_v1.0_unigene13732 biogeco3 v1.0 670
AutoFact: Tetratricopeptide repeat domain protein n=2 Tax=Arabidopsis RepID=F4JKH6_ARATH 0.0
FL-Next: tr=Eukaryotic translation initiation factor 3 subunit, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein kiaa0664 homolog 0.0
Internal
biog3_v1.0_unigene13825 biogeco3 v1.0 573
AutoFact: multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
Coding
biog3_v1.0_unigene14077 biogeco3 v1.0 149
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AED92812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 3.0e-29
Blast2go: tpr domain protein 0.0
unknown
biog3_v1.0_unigene14111 biogeco3 v1.0 355
AutoFact: WS02760.CR_M13 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02760_M13 3', mRNA sequence. 0.0
FL-Next: tr=Eukaryotic translation initiation factor 3 subunit, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein kiaa0664 homolog 0.0
Internal
biog3_v1.0_unigene14146 biogeco3 v1.0 396
AutoFact: cell division cycle protein 27-B [Arabidopsis thaliana] sp|Q8LGU6.1|CD27B_ARATH RecName: Full=Cell division cycle protein 27 homolog B; Short=CDC27 homolog B; AltName: Full=Protein HOBBIT emb|CAD31951.1| HOBBIT protein [Arabidopsis thaliana] gb|AEC06953.1 0.0
FL-Next: sp=Cell division cycle protein 27 homolog B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cell division cycle protein 27 homolog b-like 0.0
Internal
biog3_v1.0_unigene14167 biogeco3 v1.0 276
AutoFact: Eukaryotic translation initiation factor 3 subunit, putative n=1 Tax=Ricinus communis RepID=B9RHH9_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: tetratricopeptide repeat -containing protein 0.0
Internal
biog3_v1.0_unigene14322 biogeco3 v1.0 431
AutoFact: Ethylene-overproduction protein 1 n=5 Tax=Brassicaceae RepID=ETO1_ARATH 0.0
Putative coding
biog3_v1.0_unigene14375 biogeco3 v1.0 255
AutoFact: WS02760.CR_M13 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02760_M13 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein Sb04g035700; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: protein kiaa0664 homolog 0.0
Internal
biog3_v1.0_unigene14410 biogeco3 v1.0 255
AutoFact: Protein HLJ1, putative n=1 Tax=Ricinus communis RepID=B9SEQ7_RICCO 0.0
Blast2go: chaperone protein dnaj 49 0.0
unknown
biog3_v1.0_unigene14571 biogeco3 v1.0 294
AutoFact: DnaJ domain containing protein 9.0e-05
Blast2go: dnaj heat shock n-terminal domain-containing protein 0.0
Coding
biog3_v1.0_unigene14737 biogeco3 v1.0 513
AutoFact: Emb|CAA66827.1 n=1 Tax=Arabidopsis thaliana RepID=Q38955_ARATH 2.0e-19
Blast2go: binding protein 8.43983e-28
Coding
biog3_v1.0_unigene14877 biogeco3 v1.0 281
AutoFact: anaphase-promoting complex subunit 7 [Arabidopsis thaliana] sp|Q8VY89.1|APC7_ARATH RecName: Full=Anaphase-promoting complex subunit 7; AltName: Full=Cyclosome subunit 7 gb|AAL61953.1| unknown protein [Arabidopsis thaliana] gb|AAO00907.1| unknown protein [ 0.0
FL-Next: Isoform 2 of Anaphase-promoting complex subunit 7 OS=Arabidopsis thaliana GN=APC7 0.0
Blast2go: anaphase-promoting complex subunit 7 0.0
Internal
biog3_v1.0_unigene15281 biogeco3 v1.0 275
AutoFact: O-linked n-acetylglucosamine transferase, ogt, putative n=1 Tax=Ricinus communis RepID=B9RLG2_RICCO 0.0
Blast2go: tetratricopeptide repeat protein 7a-like 0.0
unknown
biog3_v1.0_unigene15672 biogeco3 v1.0 263
AutoFact: putative cyclophilin (70.8 kD) (cyp-15) [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidylprolyl isomerase domain and wd repeat-containing protein 1 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain