Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Tetratricopeptide TPR2

Term: IPR013105  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene4353 biogeco3 v1.0 444
AutoFact: Unassigned protein
Blast2go: dnaj heat shock n-terminal domain-containing protein 0.0
Putative coding
biog3_v1.0_unigene4370 biogeco3 v1.0 1992
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AED92812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tpr domain protein 0.0
Complete
biog3_v1.0_unigene4471 biogeco3 v1.0 421
AutoFact: TPR repeat-containing protein [Synechococcus sp. JA-3-3Ab] gb|ABD00149.1| tetratricopeptide repeat protein [Synechococcus sp. JA-3-3Ab] 4.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetratricopeptide tpr_1 repeat-containing protein 0.0
Putative C-terminus
biog3_v1.0_unigene4620 biogeco3 v1.0 545
AutoFact: multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: protein 0.0
Putative Complete
biog3_v1.0_unigene4746 biogeco3 v1.0 325
AutoFact: O-linked n-acetylglucosamine transferase, ogt, putative n=1 Tax=Ricinus communis RepID=B9SX16_RICCO 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene4897 biogeco3 v1.0 292
AutoFact: Eukaryotic translation initiation factor 3 subunit, putative n=1 Tax=Ricinus communis RepID=B9RHH9_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: tetratricopeptide repeat -containing protein 0.0
Internal
biog3_v1.0_unigene4961 biogeco3 v1.0 957
AutoFact: O-linked n-acetylglucosamine transferase, ogt, putative n=1 Tax=Ricinus communis RepID=B9SX16_RICCO 0.0
FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Eustoma grandiflorum (Bluebells) (Lisianthus russellianus). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene4980 biogeco3 v1.0 1178
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene4981 biogeco3 v1.0 232
AutoFact: Small glutamine-rich tetratricopeptide repeat-containing protein A, putative n=1 Tax=Ricinus communis RepID=B9SE65_RICCO 0.0
Blast2go: tpr repeat-containing thioredoxin ttl1-like 0.0
unknown
biog3_v1.0_unigene5108 biogeco3 v1.0 408
AutoFact: OTU-like cysteine protease-like [Oryza sativa Japonica Group] dbj|BAD23097.1| OTU-like cysteine protease-like [Oryza sativa Japonica Group] dbj|BAG91428.1| unnamed protein product [Oryza sativa Japonica Group] dbj|BAG99627.1| unnamed protein product [Oryz 1.0e-26
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 1.1597e-32
C-terminus
biog3_v1.0_unigene5408 biogeco3 v1.0 950
AutoFact: DnaJ protein-like [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein dnaj mitochondrial-like 0.0
C-terminus
biog3_v1.0_unigene5544 biogeco3 v1.0 508
AutoFact: cohesin-load domain-containing protein [Arabidopsis thaliana] dbj|BAB09745.1| unnamed protein product [Arabidopsis thaliana] gb|AED96068.1| cohesin-load domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: mau2 chromatid cohesion factor homolog 0.0
Internal
biog3_v1.0_unigene5562 biogeco3 v1.0 459
AutoFact: Small glutamine-rich tetratricopeptide repeat-containing protein A, putative n=1 Tax=Ricinus communis RepID=B9SE65_RICCO 0.0
FL-Next: sp=TPR repeat-containing thioredoxin TTL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: tpr repeat-containing thioredoxin ttl1-like 0.0
Internal
biog3_v1.0_unigene5803 biogeco3 v1.0 347
AutoFact: Tetratricopeptide repeat-containing protein n=4 Tax=Arabidopsis RepID=F4HS99_ARATH 5.0e-25
FL-Next: tr=Tetratricopeptide repeat-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: tetratricopeptide repeat-containing protein 4.33558e-30
Internal
biog3_v1.0_unigene5912 biogeco3 v1.0 1011
AutoFact: peptidyl-prolyl isomerase [Arabidopsis thaliana] sp|Q9LDC0.1|FKB42_ARATH RecName: Full=42 kDa peptidyl-prolyl isomerase; AltName: Full=Peptidyl-prolyl cis-trans isomerase; Short=PPIase; AltName: Full=Protein TWISTED DWARF 1; AltName: Full=Protein ULTRACUR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 42 kda peptidyl-prolyl isomerase 0.0
Putative N-terminus
biog3_v1.0_unigene5936 biogeco3 v1.0 751
AutoFact: BTB domain containing protein 2.0e-05
FL-Next: sp=ETO1-like protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: eto1-like protein 1-like 0.0
C-terminus
biog3_v1.0_unigene6065 biogeco3 v1.0 986
AutoFact: Protein HLJ1, putative n=1 Tax=Ricinus communis RepID=B9SEQ7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein dnaj 49 0.0
C-terminus
biog3_v1.0_unigene6154 biogeco3 v1.0 490
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AED92812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 7.0e-36
Blast2go: tetratricopeptide repeat domain-containing protein 0.0
Putative coding
biog3_v1.0_unigene6456 biogeco3 v1.0 563
AutoFact: multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene6784 biogeco3 v1.0 454
AutoFact: octicosapeptide/Phox/Be.1 domain-containing protein [Arabidopsis thaliana] gb|AAF70848.1|AC003113_15 F2401.12 [Arabidopsis thaliana] gb|AAL87265.1| unknown protein [Arabidopsis thaliana] gb|AAM45044.1| unknown protein [Arabidopsis thaliana] gb|AEE33961.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein 70 -interacting 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain