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Assembly Name: biogeco3 v1.0

Name: VHS

Term: IPR002014  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene17259 biogeco3 v1.0 293
AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9S2Q1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene17597 biogeco3 v1.0 254
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.54143e-44
C-terminus
biog3_v1.0_unigene18297 biogeco3 v1.0 259
AutoFact: Unassigned protein
Blast2go: vhs domain-containing protein at3g16270-like 0.0
unknown
biog3_v1.0_unigene19687 biogeco3 v1.0 316
AutoFact: putative ubiquitin-conjugating enzyme E2 23 [Arabidopsis thaliana] sp|Q9ZVX1.1|UBC23_ARATH RecName: Full=Probable ubiquitin-conjugating enzyme E2 23; AltName: Full=Ubiquitin carrier protein 23 gb|AAC64223.1| putative ubiquitin-conjugating enzyme [Arabidop 0.0
Blast2go: protein 0.0
Coding
biog3_v1.0_unigene19881 biogeco3 v1.0 249
AutoFact: microtubule bundling polypeptide TMBP200 [Nicotiana tabacum] 0.0
FL-Next: sp=Protein MOR1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: microtubule organization protein 0.0
Internal
biog3_v1.0_unigene19895 biogeco3 v1.0 122
AutoFact: Target of Myb protein 1 [Arabidopsis thaliana] ref|NP_850833.1| Target of Myb protein 1 [Arabidopsis thaliana] emb|CAC01701.1| TOM (target of myb1)-like protein [Arabidopsis thaliana] gb|AAL10477.1| AT5g16880/F2K13_30 [Arabidopsis thaliana] gb|AAL32718.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: target of myb protein 1 0.0
Internal
biog3_v1.0_unigene22534 biogeco3 v1.0 199
AutoFact: Target of Myb protein 1 [Arabidopsis thaliana] ref|NP_850833.1| Target of Myb protein 1 [Arabidopsis thaliana] emb|CAC01701.1| TOM (target of myb1)-like protein [Arabidopsis thaliana] gb|AAL10477.1| AT5g16880/F2K13_30 [Arabidopsis thaliana] gb|AAL32718.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: target of myb protein 1 0.0
Internal
biog3_v1.0_unigene22836 biogeco3 v1.0 173
AutoFact: microtubule bundling polypeptide TMBP200 [Nicotiana tabacum] 0.0
Blast2go: microtubule organization protein 0.0
unknown
biog3_v1.0_unigene23273 biogeco3 v1.0 321
AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9T6F7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene24108 biogeco3 v1.0 313
AutoFact: Probable ubiquitin-conjugating enzyme E2 23 n=2 Tax=Arabidopsis RepID=UBC23_ARATH 0.0
FL-Next: sp=Probable ubiquitin-conjugating enzyme E2 23; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable ubiquitin-conjugating enzyme e2 23-like 0.0
Internal
biog3_v1.0_unigene24515 biogeco3 v1.0 342
AutoFact: putative ubiquitin-conjugating enzyme E2 23 [Arabidopsis thaliana] sp|Q9ZVX1.1|UBC23_ARATH RecName: Full=Probable ubiquitin-conjugating enzyme E2 23; AltName: Full=Ubiquitin carrier protein 23 gb|AAC64223.1| putative ubiquitin-conjugating enzyme [Arabidop 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene24918 biogeco3 v1.0 160
AutoFact: microtubule bundling polypeptide TMBP200 [Nicotiana tabacum] 0.0
FL-Next: sp=Protein MOR1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: microtubule organization protein 0.0
Internal
biog3_v1.0_unigene25803 biogeco3 v1.0 558
AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9T6F7_RICCO 0.0
Blast2go: protein 0.0
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain