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Assembly Name: biogeco3 v1.0

Name: VHS

Term: IPR002014  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene2401 biogeco3 v1.0 353
AutoFact: microtubule bundling polypeptide TMBP200 [Nicotiana tabacum] 0.0
FL-Next: sp=Protein MOR1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: microtubule organization protein 0.0
Putative N-terminus
biog3_v1.0_unigene2680 biogeco3 v1.0 314
AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9T6F7_RICCO 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene3949 biogeco3 v1.0 467
AutoFact: Target of Myb protein 1 [Arabidopsis thaliana] ref|NP_850833.1| Target of Myb protein 1 [Arabidopsis thaliana] emb|CAC01701.1| TOM (target of myb1)-like protein [Arabidopsis thaliana] gb|AAL10477.1| AT5g16880/F2K13_30 [Arabidopsis thaliana] gb|AAL32718.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: target of myb protein 1 0.0
C-terminus
biog3_v1.0_unigene4132 biogeco3 v1.0 420
AutoFact: microtubule bundling polypeptide TMBP200 [Nicotiana tabacum] 0.0
Blast2go: microtubule organization protein 0.0
unknown
biog3_v1.0_unigene5695 biogeco3 v1.0 744
AutoFact: Unassigned protein
FL-Next: sp=VHS domain-containing protein At3g16270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: vhs domain-containing protein at3g16270-like 0.0
Internal
biog3_v1.0_unigene5986 biogeco3 v1.0 871
AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9S2Q1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog3_v1.0_unigene6350 biogeco3 v1.0 342
AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9S2Q1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene6372 biogeco3 v1.0 572
AutoFact: Unassigned protein
FL-Next: sp=VHS domain-containing protein At3g16270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: vhs domain-containing protein at3g16270-like 0.0
Putative C-terminus
biog3_v1.0_unigene7332 biogeco3 v1.0 646
AutoFact: putative ubiquitin-conjugating enzyme E2 23 [Arabidopsis thaliana] sp|Q9ZVX1.1|UBC23_ARATH RecName: Full=Probable ubiquitin-conjugating enzyme E2 23; AltName: Full=Ubiquitin carrier protein 23 gb|AAC64223.1| putative ubiquitin-conjugating enzyme [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
biog3_v1.0_unigene8105 biogeco3 v1.0 403
AutoFact: putative ubiquitin-conjugating enzyme E2 23 [Arabidopsis thaliana] sp|Q9ZVX1.1|UBC23_ARATH RecName: Full=Probable ubiquitin-conjugating enzyme E2 23; AltName: Full=Ubiquitin carrier protein 23 gb|AAC64223.1| putative ubiquitin-conjugating enzyme [Arabidop 0.0
FL-Next: sp=Probable ubiquitin-conjugating enzyme E2 23; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene9080 biogeco3 v1.0 295
AutoFact: VHS and GAT domain protein [Glycine max] 0.0
Blast2go: vhs and gat domain protein 0.0
unknown
biog3_v1.0_unigene9201 biogeco3 v1.0 530
AutoFact: VHS and GAT domain protein [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vhs and gat domain protein 0.0
Putative C-terminus
biog3_v1.0_unigene9251 biogeco3 v1.0 1641
AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9S215_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: target of myb protein 1 0.0
Complete
biog3_v1.0_unigene10002 biogeco3 v1.0 1249
AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9S2Q1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene13308 biogeco3 v1.0 354
AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9S2Q1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene13827 biogeco3 v1.0 395
AutoFact: VHS and GAT domain protein [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vhs and gat domain protein 0.0
Internal
biog3_v1.0_unigene13839 biogeco3 v1.0 206
AutoFact: putative ubiquitin-conjugating enzyme E2 23 [Arabidopsis thaliana] sp|Q9ZVX1.1|UBC23_ARATH RecName: Full=Probable ubiquitin-conjugating enzyme E2 23; AltName: Full=Ubiquitin carrier protein 23 gb|AAC64223.1| putative ubiquitin-conjugating enzyme [Arabidop 0.0
Blast2go: probable ubiquitin-conjugating enzyme e2 23-like 0.0
unknown
biog3_v1.0_unigene14336 biogeco3 v1.0 293
AutoFact: VHS and GAT domain protein [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vhs and gat domain protein 0.0
Internal
biog3_v1.0_unigene14800 biogeco3 v1.0 584
AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9S2Q1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene16898 biogeco3 v1.0 387
AutoFact: microtubule organization 1 protein [Arabidopsis thaliana] sp|Q94FN2.1|MOR1_ARATH RecName: Full=Protein MOR1; AltName: Full=Protein GEM1; AltName: Full=Protein GEMINI POLLEN 1; AltName: Full=Protein MICROTUBULE ORGANIZATION 1; AltName: Full=Protein RID5; A 0.0
FL-Next: sp=Protein MOR1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: microtubule organization protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain