Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Protamine P1

Term: IPR000221  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1566 biogeco3 v1.0 497
AutoFact: putative ribosomal protein S5 [Oryza sativa Japonica Group] dbj|BAD08197.1| putative ribosomal protein S5 [Oryza sativa Japonica Group] dbj|BAH00782.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein s5 family protein 0.0
C-terminus
biog3_v1.0_unigene3568 biogeco3 v1.0 485
AutoFact: WS0348.C21_I08 WS-SE-N-A-19 Picea glauca cDNA clone WS0348_I08 3, mRNA sequence. 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: enhancer of mrna-decapping protein 4-like 0.0
Putative C-terminus
biog3_v1.0_unigene3784 biogeco3 v1.0 757
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: enhancer of mrna-decapping protein 4-like 0.0
C-terminus
biog3_v1.0_unigene3796 biogeco3 v1.0 1262
AutoFact: enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana] gb|AEE75331.1| enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: enhancer of mrna-decapping protein 4 0.0
C-terminus
biog3_v1.0_unigene3862 biogeco3 v1.0 415
AutoFact: putative ribosomal protein S5 [Oryza sativa Japonica Group] dbj|BAD08197.1| putative ribosomal protein S5 [Oryza sativa Japonica Group] dbj|BAH00782.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
Blast2go: ribosomal protein s5 family protein 0.0
unknown
biog3_v1.0_unigene6623 biogeco3 v1.0 452
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RF24_RICCO 4.99997e-41
Blast2go: ring finger 8.7804e-41
Putative coding
biog3_v1.0_unigene6996 biogeco3 v1.0 589
AutoFact: Unassigned protein
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: enhancer of mrna-decapping protein 4-like 0.0
Internal
biog3_v1.0_unigene7623 biogeco3 v1.0 576
AutoFact: splicing factor, arginine/serine-rich 16 [Arabidopsis thaliana] gb|AEE86728.1| splicing factor, arginine/serine-rich 16 [Arabidopsis thaliana] 0.0
FL-Next: tr=Splicing factor, arginine/serine-rich, putative; Ricinus communis (Castor bean). 0.0
Blast2go: splicing arginine serine-rich 16 0.0
Putative C-terminus
biog3_v1.0_unigene14848 biogeco3 v1.0 343
AutoFact: Retinoblastoma-related protein n=1 Tax=Cocos nucifera RepID=RBR_COCNU 0.0
FL-Next: sp=Retinoblastoma-related protein; Scutellaria baicalensis (Baical skullcap). 0.0
Blast2go: retinoblastoma-related protein 0.0
Internal
biog3_v1.0_unigene16268 biogeco3 v1.0 150
AutoFact: Unassigned protein
Blast2go: enhancer of mrna-decapping protein 4-like 0.0
unknown
biog3_v1.0_unigene16434 biogeco3 v1.0 261
AutoFact: Os03g0374575 protein n=4 Tax=Oryza sativa RepID=C7J0R1_ORYSJ 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing arginine serine-rich 4 0.0
Putative N-terminus
biog3_v1.0_unigene19907 biogeco3 v1.0 324
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RF24_RICCO 4.99997e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 8.7804e-41
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain