Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: B3 DNA binding domain

Term: IPR003340  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene8310 biogeco3 v1.0 574
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
biog3_v1.0_unigene8325 biogeco3 v1.0 314
AutoFact: auxin response factor 2 [Solanum lycopersicum] 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor-like protein 0.0
Internal
biog3_v1.0_unigene9017 biogeco3 v1.0 462
AutoFact: Transcriptional factor B3; Auxin response factor [Medicago truncatula] 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response 0.0
Internal
biog3_v1.0_unigene9619 biogeco3 v1.0 484
AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 2 0.0
Internal
biog3_v1.0_unigene9642 biogeco3 v1.0 453
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
biog3_v1.0_unigene11007 biogeco3 v1.0 617
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
FL-Next: Isoform 2 of Auxin response factor 6 OS=Arabidopsis thaliana GN=ARF6 0.0
Blast2go: auxin response factor 6-like 0.0
Internal
biog3_v1.0_unigene11105 biogeco3 v1.0 1719
AutoFact: Putative auxin response factor 2/1/9 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY0_CYCRU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 2 0.0
C-terminus
biog3_v1.0_unigene13095 biogeco3 v1.0 801
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 6-like 0.0
C-terminus
biog3_v1.0_unigene13459 biogeco3 v1.0 336
AutoFact: Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SNS7_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: qa- sso1 syntaxin1- syp12a-group 0.0
C-terminus
biog3_v1.0_unigene13468 biogeco3 v1.0 568
AutoFact: Auxin response factor, putative n=1 Tax=Ricinus communis RepID=B9S0L2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 18-like 0.0
Putative N-terminus
biog3_v1.0_unigene13682 biogeco3 v1.0 299
AutoFact: Transcriptional factor B3; Auxin response factor [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response 0.0
Internal
biog3_v1.0_unigene13703 biogeco3 v1.0 255
AutoFact: Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SNS7_PHYPA 0.0
Blast2go: qa- sso1 syntaxin1- syp12a-group 0.0
unknown
biog3_v1.0_unigene13966 biogeco3 v1.0 309
AutoFact: Putative auxin response factor 5/7 (Fragment) n=1 Tax=Gnetum gnemon RepID=E1UHX8_GNEGN 0.0
Blast2go: auxin response 0.0
unknown
biog3_v1.0_unigene15085 biogeco3 v1.0 207
AutoFact: Transcriptional factor B3; Auxin response factor [Medicago truncatula] 0.0
Blast2go: auxin response 0.0
Putative coding
biog3_v1.0_unigene15610 biogeco3 v1.0 334
AutoFact: Putative auxin response factor 5/7 (Fragment) n=1 Tax=Gnetum gnemon RepID=E1UHX8_GNEGN 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 0.0
Internal
biog3_v1.0_unigene16325 biogeco3 v1.0 375
AutoFact: auxin response factor 6 [Arabidopsis thaliana] sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6 gb|AAT67072.1| ARF6 [Arabidopsis thaliana] gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana] 0.0
Blast2go: auxin response factor 6-like 0.0
Coding
biog3_v1.0_unigene17092 biogeco3 v1.0 436
AutoFact: Auxin response factor, putative n=1 Tax=Ricinus communis RepID=B9RR61_RICCO 1.0e-29
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response 5.22147e-34
Putative N-terminus
biog3_v1.0_unigene18314 biogeco3 v1.0 328
AutoFact: Putative auxin response factor 6 n=1 Tax=Amborella trichopoda RepID=E0WD84_AMBTC 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 6-like 0.0
Putative N-terminus
biog3_v1.0_unigene18741 biogeco3 v1.0 130
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SRS4_RICCO 2.0e-39
Blast2go: protein 3.53968e-42
unknown
biog3_v1.0_unigene18861 biogeco3 v1.0 528
AutoFact: auxin response factor 1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: arf4 protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain