Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Pseudouridine synthase I, TruA

Term: IPR001406  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene1802 biogeco3 v1.0 2377
• AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: yth domain family protein 0.0
Complete
biog3_v1.0_unigene2097 biogeco3 v1.0 562
• AutoFact: tRNA pseudouridine synthase family protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCD2_CUCME 0.0
• FL-Next: sp=Putative tRNA pseudouridine synthase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: trna pseudouridine synthase 0.0
Putative C-terminus
biog3_v1.0_unigene7682 biogeco3 v1.0 536
• AutoFact: tRNA pseudouridine synthase family protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCD2_CUCME 0.0
• FL-Next: tr=tRNA pseudouridine synthase family protein; Cucumis melo subsp. melo. 0.0
• Blast2go: trna pseudouridine synthase 0.0
Internal
biog3_v1.0_unigene10008 biogeco3 v1.0 350
• AutoFact: Pseudouridine synthase n=1 Tax=Ricinus communis RepID=B9RVG5_RICCO 5.0e-19
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: trna pseudouridine synthase-like 9.74504e-23
Putative C-terminus
biog3_v1.0_unigene13678 biogeco3 v1.0 445
• AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: yth domain family protein 0.0
Internal
biog3_v1.0_unigene19515 biogeco3 v1.0 237
• AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
• Blast2go: yth domain family protein 0.0
Coding
biog3_v1.0_unigene22049 biogeco3 v1.0 286
• AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: yth domain family protein 0.0
C-terminus
biog3_v1.0_unigene23276 biogeco3 v1.0 444
• AutoFact: Pseudouridine synthase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9I6V0_POPTR 0.0
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: trna pseudouridine synthase-like 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain