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Assembly Name: biogeco3 v1.0

Name: Ubiquitin-conjugating enzyme/RWD-like

Term: IPR016135  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene212 biogeco3 v1.0 1152
AutoFact: Ubiquitin-conjugating enzyme E2 35 n=42 Tax=Embryophyta RepID=UBC35_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene387 biogeco3 v1.0 563
AutoFact: glucan endo-1,3-beta-glucosidase 13 [Arabidopsis thaliana] sp|Q9FJU9.1|E1313_ARATH RecName: Full=Glucan endo-1,3-beta-glucosidase 13; AltName: Full=(1->3)-beta-glucan endohydrolase 13; Short=(1->3)-beta-glucanase 13; AltName: Full=Beta-1,3-endoglucanase 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
Putative Complete
biog3_v1.0_unigene389 biogeco3 v1.0 787
AutoFact: Riboflavin kinase/fmn adenylyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SFB1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene444 biogeco3 v1.0 758
AutoFact: Ubiquitin carrier protein n=2 Tax=Picea RepID=A9NRG7_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme e2 i 0.0
Complete
biog3_v1.0_unigene1132 biogeco3 v1.0 196
AutoFact: PREDICTED: similar to RWDD4A protein isoform 1 [Gallus gallus] 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rwd domain-containing protein 4-like 0.0
N-terminus
biog3_v1.0_unigene1290 biogeco3 v1.0 751
AutoFact: Glycoside hydrolase, family 17; Virulence factor, pectin lyase fold; X8 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
Putative C-terminus
biog3_v1.0_unigene1448 biogeco3 v1.0 461
AutoFact: Unassigned protein
FL-Next: sp=Pumilio homolog 23; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pumilio 23 0.0
Internal
biog3_v1.0_unigene1546 biogeco3 v1.0 829
AutoFact: uncharacterized protein [Arabidopsis thaliana] ref|NP_974532.1| uncharacterized protein [Arabidopsis thaliana] ref|NP_974533.1| uncharacterized protein [Arabidopsis thaliana] ref|NP_001118964.1| uncharacterized protein [Arabidopsis thaliana] emb|CAB40065. 4.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100829418 0.0
Complete
biog3_v1.0_unigene2886 biogeco3 v1.0 818
AutoFact: protein ELC [Arabidopsis thaliana] sp|Q9LHG8.1|ELC_ARATH RecName: Full=Protein ELC; Short=AtELC; AltName: Full=ESCRT-I complex subunit VPS23 homolog 1; AltName: Full=Vacuolar protein-sorting-associated protein 23 homolog 1 gb|AAG51025.1|AC069474_24 unknow 0.0
FL-Next: sp=Protein ELC; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein elc 0.0
N-terminus
biog3_v1.0_unigene3206 biogeco3 v1.0 806
AutoFact: Ubiquitin carrier protein n=1 Tax=Arachis hypogaea RepID=Q5UAG0_ARAHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme-like protein 0.0
Complete
biog3_v1.0_unigene3374 biogeco3 v1.0 456
AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=A9NKH9_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme e2 0.0
C-terminus
biog3_v1.0_unigene3500 biogeco3 v1.0 292
AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=A9NKH9_PICSI 0.0
Blast2go: ubiquitin-conjugating enzyme e2 0.0
unknown
biog3_v1.0_unigene3580 biogeco3 v1.0 973
AutoFact: Ubiquitin-conjugating enzyme 13, E2 n=3 Tax=Embryophyta RepID=D8QMV8_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene3820 biogeco3 v1.0 918
AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=A9NKT1_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin conjugating enzyme 0.0
Complete
biog3_v1.0_unigene3873 biogeco3 v1.0 1057
AutoFact: Ubiquitin carrier protein n=2 Tax=Picea sitchensis RepID=B8LMJ5_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme 0.0
Complete
biog3_v1.0_unigene3882 biogeco3 v1.0 638
AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=D5AE25_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme 0.0
Complete
biog3_v1.0_unigene4053 biogeco3 v1.0 526
AutoFact: Rwd domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQ64_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene4761 biogeco3 v1.0 413
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Pumilio homolog 23 OS=Arabidopsis thaliana GN=APUM23 0.0
Blast2go: pumilio 23 0.0
Internal
biog3_v1.0_unigene5668 biogeco3 v1.0 344
AutoFact: Ubiquitin carrier protein n=2 Tax=Picea sitchensis RepID=B8LR70_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme e2 0.0
N-terminus
biog3_v1.0_unigene5695 biogeco3 v1.0 744
AutoFact: Unassigned protein
FL-Next: sp=VHS domain-containing protein At3g16270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: vhs domain-containing protein at3g16270-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain