Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote

Term: IPR015940  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene1106 biogeco3 v1.0 454
• AutoFact: OTU-like cysteine type protease [Arabidopsis thaliana] ref|NP_850099.1| OTU-like cysteine type protease [Arabidopsis thaliana] gb|AAL24173.1| At2g27350/F12K2.7 [Arabidopsis thaliana] gb|AAD41995.2| expressed protein [Arabidopsis thaliana] gb|AAO00839.1| e 0.0
• Blast2go: otu-like cysteine type protease 0.0
Coding
biog3_v1.0_unigene1521 biogeco3 v1.0 535
• AutoFact: Contains similarity to ubiquitin carboxyl-terminal hydrolase 14 gb|Z35927 from S. cerevisiae [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein ligase 1 0.0
Putative N-terminus
biog3_v1.0_unigene1961 biogeco3 v1.0 732
• AutoFact: ubiquitin-protein ligase 1 [Arabidopsis thaliana] 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: e3 ubiquitin-protein ligase upl1-like 0.0
Internal
biog3_v1.0_unigene2175 biogeco3 v1.0 1539
• AutoFact: Ubiquitin-associated (UBA) protein [Arabidopsis thaliana] emb|CAC00737.1| putative protein [Arabidopsis thaliana] gb|AAM63026.1| unknown [Arabidopsis thaliana] gb|AAO63279.1| At3g56740 [Arabidopsis thaliana] dbj|BAE99920.1| hypothetical protein [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
biog3_v1.0_unigene2338 biogeco3 v1.0 731
• AutoFact: protein kinase-like protein [Arabidopsis thaliana] emb|CAB80112.1| protein kinase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene2620 biogeco3 v1.0 594
• AutoFact: uncharacterized protein [Arabidopsis thaliana] dbj|BAH20220.1| AT5G14540 [Arabidopsis thaliana] gb|AED92045.1| uncharacterized protein [Arabidopsis thaliana] 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
C-terminus
biog3_v1.0_unigene2908 biogeco3 v1.0 814
• AutoFact: elongation factor Ts family protein [Arabidopsis thaliana] emb|CAB43920.1| putative protein [Arabidopsis thaliana] emb|CAB79664.1| putative protein [Arabidopsis thaliana] gb|AAL10483.1| AT4g29060/F19B15_90 [Arabidopsis thaliana] gb|AEE85580.1| elongation 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
biog3_v1.0_unigene3154 biogeco3 v1.0 216
• AutoFact: UBA-like [Medicago truncatula] 0.0
• Blast2go: ubiquitin-associated protein 0.0
unknown
biog3_v1.0_unigene3246 biogeco3 v1.0 389
• AutoFact: ATP-dependent DNA helicase Q-like 3 n=2 Tax=Arabidopsis thaliana RepID=RQL3_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-dependent dna helicase q-like 3 0.0
Internal
biog3_v1.0_unigene3261 biogeco3 v1.0 735
• AutoFact: DUF1421 multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: vegetative cell wall protein gp1 -like 0.0
C-terminus
biog3_v1.0_unigene3820 biogeco3 v1.0 918
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=A9NKT1_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin conjugating enzyme 0.0
Complete
biog3_v1.0_unigene4459 biogeco3 v1.0 289
• AutoFact: ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] gb|AAY34175.1| At2g12550 [Arabidopsis thaliana] gb|AEC06204.1| ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: ubiquitin-associated ts-n domain-containing protein 0.0
Internal
biog3_v1.0_unigene4893 biogeco3 v1.0 337
• AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ubiquitin-protein ligase 1 0.0
Internal
biog3_v1.0_unigene4982 biogeco3 v1.0 377
• AutoFact: DUF1421 multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: vegetative cell wall protein gp1 -like 0.0
Internal
biog3_v1.0_unigene5019 biogeco3 v1.0 155
• AutoFact: Osmotic stress-activated protein kinase n=1 Tax=Nicotiana tabacum RepID=Q8RXH5_TOBAC 0.0
• Blast2go: serine threonine protein kinase 0.0
unknown
biog3_v1.0_unigene6010 biogeco3 v1.0 458
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene6047 biogeco3 v1.0 514
• AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=3 Tax=Vitis vinifera RepID=E0CSV0_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 0.0
Internal
biog3_v1.0_unigene6200 biogeco3 v1.0 531
• AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=3 Tax=Vitis vinifera RepID=E0CSV0_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 0.0
N-terminus
biog3_v1.0_unigene6429 biogeco3 v1.0 2013
• AutoFact: SNF1-related protein kinase [Cucumis sativus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: snf1-related protein kinase catalytic subunit alpha kin10 0.0
Complete
biog3_v1.0_unigene6536 biogeco3 v1.0 1493
• AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein ligase 1 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain