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Assembly Name: biogeco3 v1.0

Name: Zinc finger, C6HC-type

Term: IPR002867  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene13500 biogeco3 v1.0 459
AutoFact: Protein ariadne-1, putative n=1 Tax=Ricinus communis RepID=B9RZD6_RICCO 0.0
FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein ariadne- 0.0
Internal
biog3_v1.0_unigene15455 biogeco3 v1.0 269
AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
Blast2go: probable e3 ubiquitin-protein ligase ari7-like 0.0
unknown
biog3_v1.0_unigene17483 biogeco3 v1.0 247
AutoFact: Protein ariadne-1, putative n=1 Tax=Ricinus communis RepID=B9RZD6_RICCO 0.0
Blast2go: protein ariadne- 0.0
Putative coding
biog3_v1.0_unigene17693 biogeco3 v1.0 202
AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene20375 biogeco3 v1.0 203
AutoFact: IBR multi-domain protein 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Internal
biog3_v1.0_unigene20880 biogeco3 v1.0 364
AutoFact: zinc finger CCCH domain-containing protein 51 [Arabidopsis thaliana] ref|NP_850780.1| zinc finger CCCH domain-containing protein 51 [Arabidopsis thaliana] sp|Q9FNG6.1|C3H51_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 51; Short=AtC3H51 d 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger ccch domain-containing protein 51 0.0
Internal
biog3_v1.0_unigene21364 biogeco3 v1.0 296
AutoFact: pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport 1.0e-08
Blast2go: abscisic acid receptor pyl4 0.0
unknown
biog3_v1.0_unigene22097 biogeco3 v1.0 297
AutoFact: Abscisic acid receptor PYR1 n=1 Tax=Fragaria x ananassa RepID=F2YHU9_FRAAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyl2-like 0.0
C-terminus
biog3_v1.0_unigene23095 biogeco3 v1.0 240
AutoFact: Protein ariadne-1, putative n=1 Tax=Ricinus communis RepID=B9RZD6_RICCO 0.0
Blast2go: protein ariadne- 0.0
unknown
biog3_v1.0_unigene24644 biogeco3 v1.0 396
AutoFact: zinc finger-related and helicase and IBR domain-containing protein [Arabidopsis thaliana] sp|P0CE10.1|Y4102_ARATH RecName: Full=Putative uncharacterized protein At4g01020, chloroplastic; Flags: Precursor gb|AEE81967.1| zinc finger-related and helicase and 1.0e-27
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein chloroplastic-like 1.00971e-33
Internal
biog3_v1.0_unigene26630 biogeco3 v1.0 527
AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain