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Assembly Name: biogeco3 v1.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene87 biogeco3 v1.0 331
AutoFact: UDP-glycosyltransferase-like protein [Arabidopsis thaliana] sp|Q9SJL0.1|U86A1_ARATH RecName: Full=UDP-glycosyltransferase 86A1 gb|AAD31582.1| putative glucosyltransferase [Arabidopsis thaliana] gb|AAL06924.1| At2g36970/T1J8.15 [Arabidopsis thaliana] gb|AA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: udp-glycosyltransferase-like protein 0.0
C-terminus
biog3_v1.0_unigene139 biogeco3 v1.0 817
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: expansin 0.0
Putative Complete
biog3_v1.0_unigene271 biogeco3 v1.0 527
AutoFact: Ran GTPase binding protein, putative n=3 Tax=rosids RepID=B9SM24_RICCO 9.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: regulator of chromosome condensation-like protein with fyve zinc finger domain 3.24624e-32
Putative C-terminus
biog3_v1.0_unigene289 biogeco3 v1.0 930
AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 0.0
C-terminus
biog3_v1.0_unigene304 biogeco3 v1.0 438
AutoFact: UDP-glucose:salicylic acid glucosyltransferase [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: udp- 0.0
Internal
biog3_v1.0_unigene383 biogeco3 v1.0 513
AutoFact: Polygalacturonase n=1 Tax=Citrus sinensis RepID=A2IB56_CITSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
Internal
biog3_v1.0_unigene492 biogeco3 v1.0 1339
AutoFact: Ureidoglycine aminohydrolase n=5 Tax=Brassicaceae RepID=Q8GXV5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein At4g17050; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ureidoglycine aminohydrolase 0.0
Complete
biog3_v1.0_unigene595 biogeco3 v1.0 721
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AED96505.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 25-like 0.0
Putative N-terminus
biog3_v1.0_unigene614 biogeco3 v1.0 559
AutoFact: Catalytic, putative n=1 Tax=Ricinus communis RepID=B9SHS6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene751 biogeco3 v1.0 399
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 0.0
C-terminus
biog3_v1.0_unigene783 biogeco3 v1.0 663
AutoFact: DEAD box protein P68 [Pisum sativum] 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene951 biogeco3 v1.0 345
AutoFact: protein kinase family protein [Arabidopsis thaliana] dbj|BAB02454.1| unnamed protein product [Arabidopsis thaliana] gb|AAU94380.1| At3g19300 [Arabidopsis thaliana] gb|AAV59270.1| At3g19300 [Arabidopsis thaliana] gb|AEE76221.1| protein kinase family protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable receptor-like protein kinase at1g49730-like 0.0
Internal
biog3_v1.0_unigene991 biogeco3 v1.0 246
AutoFact: UDP-glucose pyrophosphorylase 3 [Arabidopsis thaliana] gb|AEE79469.1| UDP-glucose pyrophosphorylase 3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene1171 biogeco3 v1.0 434
AutoFact: Kinesin, motor region [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
Putative C-terminus
biog3_v1.0_unigene1253 biogeco3 v1.0 837
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9R8J7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: amp dependent 0.0
Internal
biog3_v1.0_unigene1276 biogeco3 v1.0 1076
AutoFact: putative relA/spoT homologous protein RSH2 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rela spot homologous protein rsh2 0.0
Internal
biog3_v1.0_unigene1284 biogeco3 v1.0 316
AutoFact: DUF1517 domain containing protein 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
biog3_v1.0_unigene1298 biogeco3 v1.0 577
AutoFact: UDP-glucose pyrophosphorylase 3 [Arabidopsis thaliana] gb|AEE79469.1| UDP-glucose pyrophosphorylase 3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: udp-glucose pyrophosphorylase 3 0.0
C-terminus
biog3_v1.0_unigene1373 biogeco3 v1.0 985
AutoFact: ABC transporter family protein n=1 Tax=Camellia sinensis RepID=F5A834_CAMSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family protein 0.0
Putative C-terminus
biog3_v1.0_unigene1401 biogeco3 v1.0 428
AutoFact: Ran GTPase binding protein, putative n=3 Tax=rosids RepID=B9SM24_RICCO 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.20831e-29
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain