Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: HTH domain AraC-type, conserved site

Term: IPR018062  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene17459 biogeco3 v1.0 327
AutoFact: Alanyl-tRNA synthetase n=4 Tax=Arabidopsis RepID=SYA_ARATH 0.0
Blast2go: alanyl-trna synthetase 0.0
unknown
biog3_v1.0_unigene17498 biogeco3 v1.0 192
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62470, mitochondrial; Flags: Precursor emb|CAB82961.1| putative protein [Arabidopsis thaliana] gb|AAQ6 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene17931 biogeco3 v1.0 153
AutoFact: glutamate receptor [Malus hupehensis] 3.0e-35
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate-gated kainate-type ion channel receptor subunit 5 1.70958e-42
Internal
biog3_v1.0_unigene18086 biogeco3 v1.0 212
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9R8J7_RICCO 0.0
Blast2go: amp dependent 0.0
unknown
biog3_v1.0_unigene18603 biogeco3 v1.0 223
AutoFact: putative protein kinase Xa21, receptor type precursor [Oryza sativa Japonica Group] dbj|BAD33650.1| putative protein kinase Xa21, receptor type precursor [Oryza sativa Japonica Group] gb|EAZ44777.1| hypothetical protein OsJ_29408 [Oryza sativa Japonica Gr 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at3g47570-like 2.8026e-45
Internal
biog3_v1.0_unigene18645 biogeco3 v1.0 125
AutoFact: putative leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] sp|Q9FII5.1|TDR_ARATH RecName: Full=Leucine-rich repeat receptor-like protein kinase TDR; AltName: Full=Protein PHLOEM INTERCALATED WITH XYLEM; AltName: Full=Tracheary elemen 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich repeat receptor-like protein kinase pxl2-like 0.0
Putative N-terminus
biog3_v1.0_unigene18651 biogeco3 v1.0 275
AutoFact: Receptor protein kinase n=1 Tax=Pinus sylvestris RepID=Q9FEU2_PINSY 0.0
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Blast2go: receptor-like protein kinase 2-like 0.0
Internal
biog3_v1.0_unigene18653 biogeco3 v1.0 249
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SF98_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cysteine-rich receptor-like protein kinase 42-like 0.0
Internal
biog3_v1.0_unigene18784 biogeco3 v1.0 262
AutoFact: putative receptor ser/thr protein [Oryza sativa Japonica Group] gb|ABF95119.1| Protein kinase domain containing protein, expressed [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich repeat family protein protein kinase family protein 0.0
Internal
biog3_v1.0_unigene18965 biogeco3 v1.0 191
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62470, mitochondrial; Flags: Precursor emb|CAB82961.1| putative protein [Arabidopsis thaliana] gb|AAQ6 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At5g14820, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene19275 biogeco3 v1.0 210
AutoFact: putative receptor-like protein kinase [Arabidopsis thaliana] 0.0
FL-Next: sp=LRR receptor-like serine/threonine-protein kinase FEI 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: brassinosteroid insensitive 1-associated receptor kinase 1 0.0
C-terminus
biog3_v1.0_unigene19491 biogeco3 v1.0 225
AutoFact: putative leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] sp|Q9FII5.1|TDR_ARATH RecName: Full=Leucine-rich repeat receptor-like protein kinase TDR; AltName: Full=Protein PHLOEM INTERCALATED WITH XYLEM; AltName: Full=Tracheary elemen 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: leucine-rich repeat receptor-like protein kinase pxl2-like 0.0
Internal
biog3_v1.0_unigene19574 biogeco3 v1.0 124
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: receptor-like protein kinase hsl1-like 0.0
Internal
biog3_v1.0_unigene19587 biogeco3 v1.0 156
AutoFact: MDR-like ABC transporter [Oryza sativa Japonica Group] 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 19-like 0.0
Internal
biog3_v1.0_unigene19617 biogeco3 v1.0 208
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: structural constituent of ribosome 0.0
Internal
biog3_v1.0_unigene19840 biogeco3 v1.0 204
AutoFact: galactokinase [Pisum sativum] 0.0
Blast2go: galactose kinase 0.0
unknown
biog3_v1.0_unigene20161 biogeco3 v1.0 310
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=3 Tax=Malpighiales RepID=B9HM46_POPTR 1.99965e-42
Blast2go: abc transporter b family member 20-like 0.0
Putative coding
biog3_v1.0_unigene20899 biogeco3 v1.0 286
AutoFact: root uracil permease 1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleobase-ascorbate transporter 6-like 0.0
Internal
biog3_v1.0_unigene21093 biogeco3 v1.0 257
AutoFact: pfam04389, Peptidase_M28, Peptidase family M28 4.99983e-42
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: zn-dependent exopeptidase-like protein 0.0
C-terminus
biog3_v1.0_unigene21692 biogeco3 v1.0 310
AutoFact: pfam04389, Peptidase_M28, Peptidase family M28 4.99983e-42
FL-Next: tr=T1F15.12 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zn-dependent exopeptidase-like protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain