Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: HTH domain AraC-type, conserved site

Term: IPR018062  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene8382 biogeco3 v1.0 1101
AutoFact: galactokinase [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactose kinase 0.0
Complete
biog3_v1.0_unigene8481 biogeco3 v1.0 653
AutoFact: pfam04389, Peptidase_M28, Peptidase family M28 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zn-dependent exopeptidase-like protein 0.0
Internal
biog3_v1.0_unigene8836 biogeco3 v1.0 977
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9S209_RICCO 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Blast2go: 4-coumarate: ligase 0.0
C-terminus
biog3_v1.0_unigene8894 biogeco3 v1.0 481
AutoFact: pfam04389, Peptidase_M28, Peptidase family M28 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zn-dependent exopeptidase-like protein 0.0
Internal
biog3_v1.0_unigene8972 biogeco3 v1.0 626
AutoFact: 4-coumarate--CoA ligase-like 5 n=3 Tax=Arabidopsis RepID=4CLL5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: acyl:coa ligase 0.0
Internal
biog3_v1.0_unigene9116 biogeco3 v1.0 860
AutoFact: nucleobase-ascorbate transporter 12 [Arabidopsis thaliana] sp|Q3E7D0.3|NAT12_ARATH RecName: Full=Nucleobase-ascorbate transporter 12; Short=AtNAT12 gb|AAM20397.1| putative membrane transporter [Arabidopsis thaliana] gb|AAN72132.1| putative membrane transp 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleobase ascorbate transporter 0.0
Internal
biog3_v1.0_unigene9537 biogeco3 v1.0 204
AutoFact: Transporter ATM1, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9T3V9_RICCO 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family of the mitochondria family 0.0
Internal
biog3_v1.0_unigene10290 biogeco3 v1.0 808
AutoFact: Phosphoenolpyruvate/phosphate translocator 1, chloroplastic n=2 Tax=Oryza sativa RepID=PPT1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: triose phosphate phosphate non-green precursor 0.0
C-terminus
biog3_v1.0_unigene10294 biogeco3 v1.0 350
AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug resistance protein 0.0
Internal
biog3_v1.0_unigene10454 biogeco3 v1.0 293
AutoFact: Unassigned protein
Blast2go: structural constituent of ribosome 4.65259e-13
Coding
biog3_v1.0_unigene10739 biogeco3 v1.0 1986
AutoFact: MDR-like ABC transporter n=1 Tax=Ginkgo biloba RepID=E6Y0T2_GINBI 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug pheromone mdr abc transporter family 0.0
C-terminus
biog3_v1.0_unigene10860 biogeco3 v1.0 423
AutoFact: putative phosphopantothenoylcysteine decarboxylase [Arabidopsis thaliana] sp|P94063.2|HAL3B_ARATH RecName: Full=Probable phosphopantothenoylcysteine decarboxylase; AltName: Full=Halotolerance protein Hal3b; Short=AtHal3b gb|AAB53106.1| HAL3B protein [Arab 0.0
FL-Next: sp=Probable phosphopantothenoylcysteine decarboxylase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phosphopantothenoylcysteine decarboxylase 0.0
Putative C-terminus
biog3_v1.0_unigene11224 biogeco3 v1.0 621
AutoFact: Phosphoenolpyruvate/phosphate translocator 1, chloroplastic n=2 Tax=Oryza sativa RepID=PPT1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: triose phosphate phosphate non-green precursor 0.0
Putative N-terminus
biog3_v1.0_unigene11278 biogeco3 v1.0 651
AutoFact: Alanyl-tRNA synthetase n=4 Tax=Arabidopsis RepID=SYA_ARATH 0.0
FL-Next: Isoform Cytoplasmic of Alanyl-tRNA synthetase OS=Arabidopsis thaliana GN=ALATS 0.0
Blast2go: alanyl-trna synthetase 0.0
C-terminus
biog3_v1.0_unigene11451 biogeco3 v1.0 1735
AutoFact: Glycolate oxidase n=1 Tax=Zantedeschia aethiopica RepID=Q84LB8_ZANAE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycolate oxidase 0.0
Complete
biog3_v1.0_unigene12029 biogeco3 v1.0 2265
AutoFact: O-acetyltransferase-like protein [Arabidopsis thaliana] ref|NP_001031478.1| O-acetyltransferase-like protein [Arabidopsis thaliana] gb|AAU05470.1| At2g34410 [Arabidopsis thaliana] gb|AAV59284.1| At2g34410 [Arabidopsis thaliana] dbj|BAD94920.1| hypothetica 0.0
FL-Next: tr=AT2G34410 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: o-acetyltransferase-like protein 0.0
Complete
biog3_v1.0_unigene13091 biogeco3 v1.0 703
AutoFact: MDR-like ABC transporter [Oryza sativa Japonica Group] 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 19-like 0.0
C-terminus
biog3_v1.0_unigene13446 biogeco3 v1.0 653
AutoFact: PREDICTED: HIV-1 Vpr binding protein, partial [Bos taurus] 0.0
FL-Next: sp=DDB1- and CUL4-associated factor homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene13555 biogeco3 v1.0 377
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene13915 biogeco3 v1.0 358
AutoFact: nudix hydrolase 3 [Arabidopsis thaliana] sp|Q8L831.1|NUDT3_ARATH RecName: Full=Nudix hydrolase 3; Short=AtNUDT3 gb|AAM53332.1| unknown protein [Arabidopsis thaliana] gb|AAN15461.1| unknown protein [Arabidopsis thaliana] gb|AEE36287.1| nudix hydrolase 3 [A 0.0
FL-Next: sp=Nudix hydrolase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nudix hydrolase 3-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain